Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| C18H9.3 | C52E12.1 | C18H9.3d.1 | C52E12.1.1 | GYF domain-containing protein gyf-1. | RING-type domain-containing protein. | 0.667 |
| C18H9.3 | F08G12.1 | C18H9.3d.1 | F08G12.1.1 | GYF domain-containing protein gyf-1. | Uncharacterized protein. | 0.661 |
| C18H9.3 | F13E6.1 | C18H9.3d.1 | F13E6.1.1 | GYF domain-containing protein gyf-1. | Uncharacterized protein F13E6.1; Belongs to the TPD52 family. | 0.661 |
| C18H9.3 | W08E12.7 | C18H9.3d.1 | W08E12.7.1 | GYF domain-containing protein gyf-1. | Peptidase_M24 domain-containing protein. | 0.668 |
| C18H9.3 | Y38H6C.16 | C18H9.3d.1 | Y38H6C.16.1 | GYF domain-containing protein gyf-1. | Uncharacterized protein. | 0.691 |
| C18H9.3 | ZK1058.9 | C18H9.3d.1 | ZK1058.9a.1 | GYF domain-containing protein gyf-1. | Uncharacterized protein. | 0.661 |
| C18H9.3 | ccdc-47 | C18H9.3d.1 | ZK1058.4.2 | GYF domain-containing protein gyf-1. | CCDC (Human Coiled Coil Domain Containing) homolog. | 0.670 |
| C18H9.3 | cgh-1 | C18H9.3d.1 | C07H6.5.1 | GYF domain-containing protein gyf-1. | ATP-dependent RNA helicase cgh-1; Probable RNA helicase required for oocyte and sperm function. Also required to prevent the physiological germline apoptosis mechanism killing essentially all developing oocytes. Belongs to the DEAD box helicase family. DDX6/DHH1 subfamily. | 0.926 |
| C18H9.3 | ife-4 | C18H9.3d.1 | C05D9.5.1 | GYF domain-containing protein gyf-1. | Eukaryotic translation initiation factor 4E-4; Recognizes and binds the 7-methylguanosine-containing mRNA cap during an early step in the initiation of protein synthesis and facilitates ribosome binding by inducing the unwinding of the mRNAs secondary structures. All 5 eIF4E proteins bind monomethyl cap structures. Only ife-1, ife-2 and ife-5 bind trimethyl cap structures which result from trans-splicing. Translation of trimethyl cap structure mRNAs may be regulated by intracellular redox state; disulfide bonds change the width and depth of the cap-binding cavity determining selectivit [...] | 0.946 |
| C18H9.3 | patr-1 | C18H9.3d.1 | F43G6.9.1 | GYF domain-containing protein gyf-1. | Protein PAT1 homolog 1; RNA-binding protein involved in deadenylation-dependent decapping of mRNAs, leading to the degradation of mRNAs. Acts as a scaffold protein that connects deadenylation and decapping machinery (By similarity); Belongs to the PAT1 family. | 0.764 |
| C52E12.1 | C18H9.3 | C52E12.1.1 | C18H9.3d.1 | RING-type domain-containing protein. | GYF domain-containing protein gyf-1. | 0.667 |
| C52E12.1 | ife-4 | C52E12.1.1 | C05D9.5.1 | RING-type domain-containing protein. | Eukaryotic translation initiation factor 4E-4; Recognizes and binds the 7-methylguanosine-containing mRNA cap during an early step in the initiation of protein synthesis and facilitates ribosome binding by inducing the unwinding of the mRNAs secondary structures. All 5 eIF4E proteins bind monomethyl cap structures. Only ife-1, ife-2 and ife-5 bind trimethyl cap structures which result from trans-splicing. Translation of trimethyl cap structure mRNAs may be regulated by intracellular redox state; disulfide bonds change the width and depth of the cap-binding cavity determining selectivit [...] | 0.564 |
| F08G12.1 | C18H9.3 | F08G12.1.1 | C18H9.3d.1 | Uncharacterized protein. | GYF domain-containing protein gyf-1. | 0.661 |
| F08G12.1 | F13E6.1 | F08G12.1.1 | F13E6.1.1 | Uncharacterized protein. | Uncharacterized protein F13E6.1; Belongs to the TPD52 family. | 0.776 |
| F08G12.1 | W08E12.7 | F08G12.1.1 | W08E12.7.1 | Uncharacterized protein. | Peptidase_M24 domain-containing protein. | 0.758 |
| F08G12.1 | Y38H6C.16 | F08G12.1.1 | Y38H6C.16.1 | Uncharacterized protein. | Uncharacterized protein. | 0.758 |
| F08G12.1 | ZK1058.9 | F08G12.1.1 | ZK1058.9a.1 | Uncharacterized protein. | Uncharacterized protein. | 0.758 |
| F08G12.1 | ccdc-47 | F08G12.1.1 | ZK1058.4.2 | Uncharacterized protein. | CCDC (Human Coiled Coil Domain Containing) homolog. | 0.751 |
| F13E6.1 | C18H9.3 | F13E6.1.1 | C18H9.3d.1 | Uncharacterized protein F13E6.1; Belongs to the TPD52 family. | GYF domain-containing protein gyf-1. | 0.661 |
| F13E6.1 | F08G12.1 | F13E6.1.1 | F08G12.1.1 | Uncharacterized protein F13E6.1; Belongs to the TPD52 family. | Uncharacterized protein. | 0.776 |
page 1 of 3