STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C23G10.1Putative serine/threonine-protein phosphatase C23G10.1. (456 aa)    
Predicted Functional Partners:
col-54
Col_cuticle_N domain-containing protein.
    
 
 0.912
col-41
Col_cuticle_N domain-containing protein.
    
 
 0.861
B0024.4
Uncharacterized protein.
      
 0.850
clec-174
C-type lectin domain-containing protein.
      
 0.818
dod-22
CUB_2 domain-containing protein.
      
 0.809
fmo-2
Dimethylaniline monooxygenase [N-oxide-forming].
      
 0.809
ttr-21
TransThyretin-Related family domain.
      
 0.807
clec-71
C-type lectin domain-containing protein.
      
 0.804
clec-7
C-type LECtin.
      
 0.698
K06A5.3
Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod.
   
    0.592
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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