STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C23G10.2RutC family protein C23G10.2. (171 aa)    
Predicted Functional Partners:
T26C12.1
Acetolactate synthase-like protein.
  
 
 0.833
B0334.3
Uncharacterized protein; Belongs to the TPP enzyme family.
  
 
 0.831
ntl-9
NOT-Like (Yeast CCR4/NOT complex component).
    
 
 0.794
ntl-4
NOT-Like (Yeast CCR4/NOT complex component).
    
 
 0.791
let-711
Not1 domain-containing protein.
    
 
 0.739
exos-7
RNase_PH domain-containing protein.
    
   0.713
B0491.7
TP_methylase domain-containing protein.
  
  
 0.682
exos-4.1
Putative exosome complex component RRP41; Non-catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and participates in a multitude of cellular RNA processing and degradation events; Belongs to the RNase PH family.
  
 
 0.646
mel-32
Serine hydroxymethyltransferase; Interconversion of serine and glycine; Belongs to the SHMT family.
  
  
 0.643
dph-3
DPH3 homolog; Required for the first step of diphthamide biosynthesis, the transfer of 3-amino-3-carboxypropyl from S-adenosyl-L-methionine to a histidine residue. Diphthamide is a post-translational modification of histidine which occurs in elongation factor 2 (By similarity).
      
 0.643
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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