Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C25A1.1 | Y40D12A.1 | C25A1.1.1 | Y40D12A.1a.1 | Nefa_Nip30_N domain-containing protein. | Adrift-type SAM-dependent 2'-O-MTase domain-containing protein. | 0.691 |
C25A1.1 | Y66D12A.9 | C25A1.1.1 | Y66D12A.9.1 | Nefa_Nip30_N domain-containing protein. | Uncharacterized protein. | 0.808 |
C25A1.1 | bud-31 | C25A1.1.1 | C07A9.2.1 | Nefa_Nip30_N domain-containing protein. | Protein BUD31 homolog; Involved in pre-mRNA splicing process. | 0.528 |
C25A1.1 | camt-1 | C25A1.1.1 | T05C1.4a.1 | Nefa_Nip30_N domain-containing protein. | CAMTA (CAlModulin-binding Transcriptional activator). | 0.535 |
C25A1.1 | cdc-5L | C25A1.1.1 | D1081.8.1 | Nefa_Nip30_N domain-containing protein. | Cell Division Cycle related. | 0.853 |
C25A1.1 | ceh-45 | C25A1.1.1 | ZK993.1a.1 | Nefa_Nip30_N domain-containing protein. | Homeobox domain-containing protein. | 0.916 |
C25A1.1 | exos-4.2 | C25A1.1.1 | Y6D11A.1.1 | Nefa_Nip30_N domain-containing protein. | RNase_PH domain-containing protein. | 0.538 |
C25A1.1 | prp-8 | C25A1.1.1 | C50C3.6.1 | Nefa_Nip30_N domain-containing protein. | Pre-mRNA-splicing factor 8 homolog; Functions as a scaffold that mediates the ordered assembly of spliceosomal proteins and snRNAs. Required for the assembly of the U4/U6-U5 tri-snRNP complex. Functions as scaffold that positions spliceosomal U2, U5 and U6 snRNAs at splice sites on pre-mRNA substrates, so that splicing can occur. Interacts with both the 5' and the 3' splice site. | 0.848 |
C25A1.1 | rnp-4 | C25A1.1.1 | R07E5.14.1 | Nefa_Nip30_N domain-containing protein. | RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. | 0.538 |
C25A1.1 | syf-1 | C25A1.1.1 | C50F2.3.1 | Nefa_Nip30_N domain-containing protein. | SYF pre-mRNA splicing factor homolog. | 0.845 |
Y40D12A.1 | C25A1.1 | Y40D12A.1a.1 | C25A1.1.1 | Adrift-type SAM-dependent 2'-O-MTase domain-containing protein. | Nefa_Nip30_N domain-containing protein. | 0.691 |
Y40D12A.1 | exos-4.2 | Y40D12A.1a.1 | Y6D11A.1.1 | Adrift-type SAM-dependent 2'-O-MTase domain-containing protein. | RNase_PH domain-containing protein. | 0.413 |
Y66D12A.9 | C25A1.1 | Y66D12A.9.1 | C25A1.1.1 | Uncharacterized protein. | Nefa_Nip30_N domain-containing protein. | 0.808 |
bud-31 | C25A1.1 | C07A9.2.1 | C25A1.1.1 | Protein BUD31 homolog; Involved in pre-mRNA splicing process. | Nefa_Nip30_N domain-containing protein. | 0.528 |
bud-31 | cdc-5L | C07A9.2.1 | D1081.8.1 | Protein BUD31 homolog; Involved in pre-mRNA splicing process. | Cell Division Cycle related. | 0.992 |
bud-31 | prp-8 | C07A9.2.1 | C50C3.6.1 | Protein BUD31 homolog; Involved in pre-mRNA splicing process. | Pre-mRNA-splicing factor 8 homolog; Functions as a scaffold that mediates the ordered assembly of spliceosomal proteins and snRNAs. Required for the assembly of the U4/U6-U5 tri-snRNP complex. Functions as scaffold that positions spliceosomal U2, U5 and U6 snRNAs at splice sites on pre-mRNA substrates, so that splicing can occur. Interacts with both the 5' and the 3' splice site. | 0.992 |
bud-31 | rnp-4 | C07A9.2.1 | R07E5.14.1 | Protein BUD31 homolog; Involved in pre-mRNA splicing process. | RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. | 0.824 |
bud-31 | syf-1 | C07A9.2.1 | C50F2.3.1 | Protein BUD31 homolog; Involved in pre-mRNA splicing process. | SYF pre-mRNA splicing factor homolog. | 0.999 |
camt-1 | C25A1.1 | T05C1.4a.1 | C25A1.1.1 | CAMTA (CAlModulin-binding Transcriptional activator). | Nefa_Nip30_N domain-containing protein. | 0.535 |
cdc-5L | C25A1.1 | D1081.8.1 | C25A1.1.1 | Cell Division Cycle related. | Nefa_Nip30_N domain-containing protein. | 0.853 |
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