Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C27D6.1 | enol-1 | C27D6.1.1 | T21B10.2c.2 | Uncharacterized protein C27D6.1. | Enolase; Belongs to the enolase family. | 0.401 |
C27D6.1 | kars-1 | C27D6.1.1 | T02G5.9b.1 | Uncharacterized protein C27D6.1. | Lysine--tRNA ligase; Catalyzes the specific attachment of an amino acid to its cognate tRNA in a 2 step reaction: the amino acid (AA) is first activated by ATP to form AA-AMP and then transferred to the acceptor end of the tRNA; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.406 |
C27D6.1 | nphp-1 | C27D6.1.1 | M28.7.1 | Uncharacterized protein C27D6.1. | Nephrocystin-1-like protein; May be necessary for initial assembly of the cilium. | 0.405 |
C27D6.1 | zyg-9 | C27D6.1.1 | F22B5.7.1 | Uncharacterized protein C27D6.1. | Zygote defective protein 9; Plays a major role in organizing microtubules and spindle poles during mitosis and meiosis in one-cell stage embryos. Required for default nucleus positioning in oocytes. | 0.408 |
enol-1 | C27D6.1 | T21B10.2c.2 | C27D6.1.1 | Enolase; Belongs to the enolase family. | Uncharacterized protein C27D6.1. | 0.401 |
enol-1 | kars-1 | T21B10.2c.2 | T02G5.9b.1 | Enolase; Belongs to the enolase family. | Lysine--tRNA ligase; Catalyzes the specific attachment of an amino acid to its cognate tRNA in a 2 step reaction: the amino acid (AA) is first activated by ATP to form AA-AMP and then transferred to the acceptor end of the tRNA; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.595 |
kars-1 | C27D6.1 | T02G5.9b.1 | C27D6.1.1 | Lysine--tRNA ligase; Catalyzes the specific attachment of an amino acid to its cognate tRNA in a 2 step reaction: the amino acid (AA) is first activated by ATP to form AA-AMP and then transferred to the acceptor end of the tRNA; Belongs to the class-II aminoacyl-tRNA synthetase family. | Uncharacterized protein C27D6.1. | 0.406 |
kars-1 | enol-1 | T02G5.9b.1 | T21B10.2c.2 | Lysine--tRNA ligase; Catalyzes the specific attachment of an amino acid to its cognate tRNA in a 2 step reaction: the amino acid (AA) is first activated by ATP to form AA-AMP and then transferred to the acceptor end of the tRNA; Belongs to the class-II aminoacyl-tRNA synthetase family. | Enolase; Belongs to the enolase family. | 0.595 |
nphp-1 | C27D6.1 | M28.7.1 | C27D6.1.1 | Nephrocystin-1-like protein; May be necessary for initial assembly of the cilium. | Uncharacterized protein C27D6.1. | 0.405 |
zyg-9 | C27D6.1 | F22B5.7.1 | C27D6.1.1 | Zygote defective protein 9; Plays a major role in organizing microtubules and spindle poles during mitosis and meiosis in one-cell stage embryos. Required for default nucleus positioning in oocytes. | Uncharacterized protein C27D6.1. | 0.408 |