STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C27F2.6Uncharacterized protein. (165 aa)    
Predicted Functional Partners:
str-116
Seven TM Receptor.
   
  
 0.697
str-151
Seven TM Receptor.
   
  
 0.682
srbc-62
Serpentine Receptor, class BC (Class B-like).
   
  
 0.678
srx-90
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
  
 0.657
str-172
Seven TM Receptor.
   
  
 0.657
pfd-6
Probable prefoldin subunit 6; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins (By similarity). Required for positioning of the mitotic spindle.
   
  
 0.628
sra-1
Serpentine receptor class alpha-1.
   
  
 0.623
D2062.5
Uncharacterized protein.
   
    0.604
srh-184
Serpentine Receptor, class H.
   
  
 0.580
C17C3.9
Uncharacterized protein.
   
    0.572
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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