STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C30B5.6Uncharacterized protein. (547 aa)    
Predicted Functional Partners:
C42D4.3
DB domain-containing protein.
   
 
 0.921
F08F3.4
Epimerase domain-containing protein.
      
 0.912
ttr-15
Transthyretin-like protein 15.
      
 0.850
T05F1.9
Uncharacterized protein.
      
 0.758
T22B7.3
Uncharacterized protein.
      
 0.758
hphd-1
Hydroxyacid-oxoacid transhydrogenase, mitochondrial; Catalyzes the cofactor-independent reversible oxidation of gamma-hydroxybutyrate (GHB) to succinic semialdehyde (SSA) coupled to reduction of 2-ketoglutarate (2-KG) to D-2-hydroxyglutarate (D-2-HG). L-3-hydroxybutyrate (L-3-OHB) is also a substrate for HOT when using 2- KG as hydrogen acceptor, resulting in the formation of D-2-HG. Belongs to the iron-containing alcohol dehydrogenase family. Hydroxyacid-oxoacid transhydrogenase subfamily.
      
 0.700
nphp-4
NePHronoPhthisis (Human kidney disease) homolog.
   
  
 0.671
tmem-231
TMEM (Human TransMEMbrane protein) homolog.
   
  
 0.554
mks-2
MecKel-Gruber Syndrome (MKS) homolog.
 
      0.508
tmem-17
TMEM (Human TransMEMbrane protein) homolog.
   
  
 0.478
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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