STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C30B5.7Uncharacterized protein. (350 aa)    
Predicted Functional Partners:
clec-89
C-type LECtin.
   
  
 0.909
C37H5.13
Uncharacterized protein.
      
 0.902
nas-3
Zinc metalloproteinase nas-3; Metalloprotease.
      
 0.812
M57.2
Uncharacterized protein.
      
 0.580
mgl-3
G_PROTEIN_RECEP_F3_4 domain-containing protein.
   
    0.482
pmk-2
Mitogen-activated protein kinase pmk-2; Responds to activation by environmental stress and pro- inflammatory cytokines by phosphorylating downstream targets.
   
  
 0.466
lys-1
Lysozyme-like protein 1; Involved in resistance to Gram-negative bacterium S.marcescens and to bacterium Gram-positive S.aureus infection.
      
 0.463
T07D1.2
Zf-RING_UBOX domain-containing protein.
      
 0.461
kcnl-2
CaMBD domain-containing protein.
   
    0.455
exp-2
Uncharacterized protein; Belongs to the potassium channel family.
   
    0.442
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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