STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C32H11.5DUF148 domain-containing protein. (194 aa)    
Predicted Functional Partners:
B0280.7
Uncharacterized protein B0280.7.
   
    0.592
phg-1
Growth arrest-specific protein 1 homolog; Role in pharynx function or development.
   
    0.525
sgt-1
Small Glutamine-rich Tetratrico repeat protein.
    
   0.467
D2024.4
Uncharacterized protein.
   
    0.445
lips-3
LIPaSe related.
   
    0.438
abu-13
Activated in Blocked Unfolded protein response.
   
    0.426
Y75B7AR.1
Uncharacterized protein.
   
    0.416
grl-5
Ground-like domain-containing protein.
   
    0.403
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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