STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ceh-31Homeobox protein ceh-31. (260 aa)    
Predicted Functional Partners:
egrh-2
EGR (Early Growth factor Response factor) Homolog.
    
 
 0.813
hlh-19
BHLH domain-containing protein.
   
  
 0.718
ceh-93
Homeobox domain-containing protein.
    
 
 0.708
ceh-87
Homeobox domain-containing protein.
      
 0.697
tbx-9
T-box transcription factor tbx-9; Involved in the control of early morphogenesis of the intestine, hypodermis and body-wall muscle. Appears to have partially redundant function to tbx-8.
    
 
 0.605
ceh-60
Homeobox domain-containing protein.
    
 
 0.564
tbx-8
T-box transcription factor tbx-8; Involved in the control of early morphogenesis of the intestine, hypodermis and body-wall muscle. Appears to have partially redundant function to tbx-9.
    
 
 0.532
lim-7
LIM domain family.
   
 
 0.490
F20D12.2
PCI domain-containing protein.
      
 0.465
ceh-54
Homeobox domain-containing protein.
    
 
 0.461
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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