Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
B0334.3 | prx-1 | B0334.3a.2 | C11H1.4a.2 | Uncharacterized protein; Belongs to the TPP enzyme family. | AAA domain-containing protein. | 0.442 |
B0334.3 | prx-5 | B0334.3a.2 | C34C6.6a.1 | Uncharacterized protein; Belongs to the TPP enzyme family. | TPR_REGION domain-containing protein. | 0.936 |
daf-22 | prx-13 | Y57A10C.6.1 | F32A5.6.1 | Non-specific lipid-transfer protein-like 2; Catalyzes the thiolytic cleavage of 3-ketoacyl-CoA with 8-16 carbon residues in the acyl group using a ping-pong mechanism whereby binding to 3-ketooctanoyl-CoA results in the release of acetyl-CoA and the subsequent addition of CoA produces 3-ketohexanohyl-CoA. Involved in the biosynthesis of the dauer pheromone by providing short chains of fatty acid that are attached to the ascarylose sugars of the pheromone. Belongs to the thiolase-like superfamily. Thiolase family. | Probable peroxisomal membrane protein PEX13; Component of the peroxisomal translocation machinery with PEX14 and PEX17. Functions as a docking factor for the predominantly cytoplasmic PTS1 receptor (PAS10/PEX5) (By similarity); Belongs to the peroxin-13 family. | 0.456 |
daf-22 | prx-5 | Y57A10C.6.1 | C34C6.6a.1 | Non-specific lipid-transfer protein-like 2; Catalyzes the thiolytic cleavage of 3-ketoacyl-CoA with 8-16 carbon residues in the acyl group using a ping-pong mechanism whereby binding to 3-ketooctanoyl-CoA results in the release of acetyl-CoA and the subsequent addition of CoA produces 3-ketohexanohyl-CoA. Involved in the biosynthesis of the dauer pheromone by providing short chains of fatty acid that are attached to the ascarylose sugars of the pheromone. Belongs to the thiolase-like superfamily. Thiolase family. | TPR_REGION domain-containing protein. | 0.923 |
daf-22 | prx-6 | Y57A10C.6.1 | F39G3.7.1 | Non-specific lipid-transfer protein-like 2; Catalyzes the thiolytic cleavage of 3-ketoacyl-CoA with 8-16 carbon residues in the acyl group using a ping-pong mechanism whereby binding to 3-ketooctanoyl-CoA results in the release of acetyl-CoA and the subsequent addition of CoA produces 3-ketohexanohyl-CoA. Involved in the biosynthesis of the dauer pheromone by providing short chains of fatty acid that are attached to the ascarylose sugars of the pheromone. Belongs to the thiolase-like superfamily. Thiolase family. | AAA domain-containing protein. | 0.500 |
prx-1 | B0334.3 | C11H1.4a.2 | B0334.3a.2 | AAA domain-containing protein. | Uncharacterized protein; Belongs to the TPP enzyme family. | 0.442 |
prx-1 | prx-11 | C11H1.4a.2 | C47B2.8.1 | AAA domain-containing protein. | PeRoXisome assembly factor. | 0.834 |
prx-1 | prx-12 | C11H1.4a.2 | F08B12.2.1 | AAA domain-containing protein. | Putative peroxisome assembly protein 12; Required for protein import into peroxisomes; Belongs to the pex2/pex10/pex12 family. | 0.880 |
prx-1 | prx-13 | C11H1.4a.2 | F32A5.6.1 | AAA domain-containing protein. | Probable peroxisomal membrane protein PEX13; Component of the peroxisomal translocation machinery with PEX14 and PEX17. Functions as a docking factor for the predominantly cytoplasmic PTS1 receptor (PAS10/PEX5) (By similarity); Belongs to the peroxin-13 family. | 0.950 |
prx-1 | prx-14 | C11H1.4a.2 | R07H5.1.1 | AAA domain-containing protein. | Pex14_N domain-containing protein. | 0.802 |
prx-1 | prx-19 | C11H1.4a.2 | F54F2.8.2 | AAA domain-containing protein. | Putative peroxisomal biogenesis factor 19; Belongs to the peroxin-19 family. | 0.921 |
prx-1 | prx-3 | C11H1.4a.2 | C15H9.8a.1 | AAA domain-containing protein. | PeRoXisome assembly factor. | 0.703 |
prx-1 | prx-5 | C11H1.4a.2 | C34C6.6a.1 | AAA domain-containing protein. | TPR_REGION domain-containing protein. | 0.950 |
prx-1 | prx-6 | C11H1.4a.2 | F39G3.7.1 | AAA domain-containing protein. | AAA domain-containing protein. | 0.988 |
prx-11 | prx-1 | C47B2.8.1 | C11H1.4a.2 | PeRoXisome assembly factor. | AAA domain-containing protein. | 0.834 |
prx-11 | prx-12 | C47B2.8.1 | F08B12.2.1 | PeRoXisome assembly factor. | Putative peroxisome assembly protein 12; Required for protein import into peroxisomes; Belongs to the pex2/pex10/pex12 family. | 0.978 |
prx-11 | prx-13 | C47B2.8.1 | F32A5.6.1 | PeRoXisome assembly factor. | Probable peroxisomal membrane protein PEX13; Component of the peroxisomal translocation machinery with PEX14 and PEX17. Functions as a docking factor for the predominantly cytoplasmic PTS1 receptor (PAS10/PEX5) (By similarity); Belongs to the peroxin-13 family. | 0.984 |
prx-11 | prx-14 | C47B2.8.1 | R07H5.1.1 | PeRoXisome assembly factor. | Pex14_N domain-containing protein. | 0.970 |
prx-11 | prx-19 | C47B2.8.1 | F54F2.8.2 | PeRoXisome assembly factor. | Putative peroxisomal biogenesis factor 19; Belongs to the peroxin-19 family. | 0.989 |
prx-11 | prx-3 | C47B2.8.1 | C15H9.8a.1 | PeRoXisome assembly factor. | PeRoXisome assembly factor. | 0.758 |
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