STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ceh-7Homeobox protein ceh-7. (84 aa)    
Predicted Functional Partners:
tbx-36
Putative T-box protein 36.
      
 0.703
C02F12.5
BPTI/Kunitz inhibitor domain-containing protein C02F12.5.
      
 0.700
nas-17
Zinc metalloproteinase nas-17; Metalloprotease.
   
  
 0.696
nhr-113
Nuclear Hormone Receptor family.
      
 0.693
ceh-49
One cut domain family member.
      
 0.667
nas-19
Zinc metalloproteinase nas-19; Metalloprotease.
      
 0.662
ztf-25
Zinc finger putative Transcription Factor family.
      
 0.660
npax-4
Paired domain-containing protein.
      
 0.632
ceh-79
C. Elegans Homeobox.
      
 0.614
ceh-83
Homeobox domain-containing protein.
      
 0.613
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.