Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| athp-3 | fkh-4 | Y116A8C.22.1 | C29F7.5.1 | PHD domain-containing protein. | Fork-head domain-containing protein. | 0.925 |
| athp-3 | vet-1 | Y116A8C.22.1 | T05E7.5.1 | PHD domain-containing protein. | Very Early Transcript. | 0.455 |
| athp-3 | vet-2 | Y116A8C.22.1 | C35E7.1a.1 | PHD domain-containing protein. | Very Early Transcript. | 0.637 |
| dsl-2 | sdz-28 | W09G12.1.1 | R52.1.1 | Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. | SKN-1 Dependent Zygotic transcript. | 0.542 |
| dsl-2 | sepa-1 | W09G12.1.1 | M01E5.6.1 | Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. | Protein sepa-1; Adapter protein that connects P-granules in somatic cells with the autophagic machinery. Association with other adapters such as epg-2 and P-granule components such as pgl-3 is required for the accumulation and degradation of P-granules by autophagy in somatic cells. This ensures exclusive localization of the P-granules in germ cells. | 0.637 |
| dsl-2 | vet-1 | W09G12.1.1 | T05E7.5.1 | Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. | Very Early Transcript. | 0.627 |
| dsl-2 | vet-2 | W09G12.1.1 | C35E7.1a.1 | Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. | Very Early Transcript. | 0.615 |
| dsl-2 | vet-6 | W09G12.1.1 | F44F1.7.1 | Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. | Very Early Transcript. | 0.635 |
| fkh-4 | athp-3 | C29F7.5.1 | Y116A8C.22.1 | Fork-head domain-containing protein. | PHD domain-containing protein. | 0.925 |
| fkh-4 | sepa-1 | C29F7.5.1 | M01E5.6.1 | Fork-head domain-containing protein. | Protein sepa-1; Adapter protein that connects P-granules in somatic cells with the autophagic machinery. Association with other adapters such as epg-2 and P-granule components such as pgl-3 is required for the accumulation and degradation of P-granules by autophagy in somatic cells. This ensures exclusive localization of the P-granules in germ cells. | 0.491 |
| fkh-4 | vet-1 | C29F7.5.1 | T05E7.5.1 | Fork-head domain-containing protein. | Very Early Transcript. | 0.538 |
| fkh-4 | vet-2 | C29F7.5.1 | C35E7.1a.1 | Fork-head domain-containing protein. | Very Early Transcript. | 0.839 |
| sdz-27 | sdz-28 | R07H5.4.1 | R52.1.1 | SKN-1 Dependent Zygotic transcript. | SKN-1 Dependent Zygotic transcript. | 0.824 |
| sdz-27 | sig-7 | R07H5.4.1 | F39H2.2a.2 | SKN-1 Dependent Zygotic transcript. | Peptidyl-prolyl cis-trans isomerase sig-7; Probable PPIase that accelerates the folding of proteins (By similarity). It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity). Involved in RNA polymerase II (RNA pol II)-mediated transcription elongation, and in primary transcript splicing, including co-transcriptional trans- splicing, in association with the catalytic subunit of the RNA pol II complex ama-1. Also plays a role in the regulation of elongation-dependent phosphorylation of ama-1 to control transcription. Involved in the transc [...] | 0.853 |
| sdz-27 | sqd-1 | R07H5.4.1 | Y73B6BL.6b.3 | SKN-1 Dependent Zygotic transcript. | Homologous to Drosophila SQD (Squid) protein. | 0.699 |
| sdz-27 | vet-2 | R07H5.4.1 | C35E7.1a.1 | SKN-1 Dependent Zygotic transcript. | Very Early Transcript. | 0.813 |
| sdz-28 | dsl-2 | R52.1.1 | W09G12.1.1 | SKN-1 Dependent Zygotic transcript. | Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. | 0.542 |
| sdz-28 | sdz-27 | R52.1.1 | R07H5.4.1 | SKN-1 Dependent Zygotic transcript. | SKN-1 Dependent Zygotic transcript. | 0.824 |
| sdz-28 | sepa-1 | R52.1.1 | M01E5.6.1 | SKN-1 Dependent Zygotic transcript. | Protein sepa-1; Adapter protein that connects P-granules in somatic cells with the autophagic machinery. Association with other adapters such as epg-2 and P-granule components such as pgl-3 is required for the accumulation and degradation of P-granules by autophagy in somatic cells. This ensures exclusive localization of the P-granules in germ cells. | 0.606 |
| sdz-28 | sig-7 | R52.1.1 | F39H2.2a.2 | SKN-1 Dependent Zygotic transcript. | Peptidyl-prolyl cis-trans isomerase sig-7; Probable PPIase that accelerates the folding of proteins (By similarity). It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity). Involved in RNA polymerase II (RNA pol II)-mediated transcription elongation, and in primary transcript splicing, including co-transcriptional trans- splicing, in association with the catalytic subunit of the RNA pol II complex ama-1. Also plays a role in the regulation of elongation-dependent phosphorylation of ama-1 to control transcription. Involved in the transc [...] | 0.710 |
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