STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C39E9.11Proline Rich mitotic Checkpoint Control factor homolog. (405 aa)    
Predicted Functional Partners:
sel-13
Suppressor/Enhancer of Lin-12.
   
 
 0.928
M03F8.3
Uncharacterized protein.
   
 0.925
dxbp-1
Kin17_mid domain-containing protein.
   
  
 0.892
syf-1
SYF pre-mRNA splicing factor homolog.
   
 
 0.880
skp-1
Uncharacterized protein T27F2.1.
   
 
 0.879
cyn-13
Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins.
   
 0.833
bud-31
Protein BUD31 homolog; Involved in pre-mRNA splicing process.
   
 
  0.816
lmd-1
LysM domain-containing protein.
   
  
 0.815
isy-1
Protein isy-1; Regulates the processing of the mir-60 microRNA (miRNA), which in turn negatively regulates the expression of the transcription factor zip-10. Does not affect the splicing of zip-10 ; Belongs to the ISY1 family.
   
 
  0.812
cec-10
C.Elegans Chromodomain protein.
   
  
 0.811
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.