STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptr-3SSD domain-containing protein. (927 aa)    
Predicted Functional Partners:
sdz-37
SKN-1 Dependent Zygotic transcript.
      
 0.740
nhr-139
Nuclear receptor domain-containing protein.
      
 0.695
nhr-123
Nuclear Hormone Receptor family.
      
 0.673
nhr-181
Nuclear Hormone Receptor family; Belongs to the nuclear hormone receptor family.
      
 0.660
nhr-226
Nuclear Hormone Receptor family.
      
 0.660
nhr-42
Nuclear hormone receptor family member nhr-42; Orphan nuclear receptor; Belongs to the nuclear hormone receptor family.
      
 0.614
abu-10
Activated in Blocked Unfolded protein response.
   
  
 0.570
grl-17
Ground-like domain-containing protein.
      
 0.549
nhr-74
Nuclear Hormone Receptor family.
      
 0.546
grl-15
Ground-like domain-containing protein.
   
  
 0.539
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.