STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nkb-2Na+/K+ ATPase, Beta subunit. (374 aa)    
Predicted Functional Partners:
F31E8.5
Uncharacterized protein.
   
    0.945
catp-4
Sodium/potassium-transporting ATPase subunit alpha.
   
 0.898
C17H12.3
Tyrosine-protein phosphatase.
   
    0.862
C06A8.6
LRRcap domain-containing protein.
   
    0.848
K05F1.9
Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod.
   
    0.847
rmd-3
Regulator of Microtubule Dynamics.
   
  
 0.846
C04G2.5
Uncharacterized protein.
   
    0.846
C24D10.2
Uncharacterized protein.
   
    0.846
C27D6.3
Uncharacterized protein C27D6.3.
   
    0.846
K01H12.4
Uncharacterized protein.
   
    0.846
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.