Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C44B11.1 | algn-2 | C44B11.1.1 | F09E5.2.1 | Uncharacterized protein. | Asparagine Linked Glycosylation (ALG) homolog, Nematode. | 0.918 |
C44B11.1 | eef-1G | C44B11.1.1 | F17C11.9a.1 | Uncharacterized protein. | Probable elongation factor 1-gamma; Probably plays a role in anchoring the complex to other cellular components. | 0.546 |
C44B11.1 | fah-1 | C44B11.1.1 | K10C2.4.2 | Uncharacterized protein. | Fumarylacetoacetase. | 0.689 |
C44B11.1 | kap-1 | C44B11.1.1 | F08F8.3a.1 | Uncharacterized protein. | Kinesin-Associated Protein. | 0.585 |
C44B11.1 | pyk-1 | C44B11.1.1 | F25H5.3e.1 | Uncharacterized protein. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.477 |
C44B11.1 | pyk-2 | C44B11.1.1 | ZK593.1a.1 | Uncharacterized protein. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.477 |
C44B11.1 | rpl-7A | C44B11.1.1 | Y24D9A.4a.1 | Uncharacterized protein. | 60S ribosomal protein L7a; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.818 |
C44B11.1 | smg-2 | C44B11.1.1 | Y48G8AL.6.2 | Uncharacterized protein. | Regulator of nonsense transcripts 1; RNA-dependent helicase and ATPase required for nonsense- mediated decay (NMD) of mRNAs containing premature stop codons. Is recruited to mRNAs upon translation termination and undergoes a cycle of phosphorylation and dephosphorylation; its phosphorylation appears to be a key step in NMD. The formation of an smg-2-3-4 surveillance complex is believed to activate NMD (By similarity). | 0.691 |
C44B11.1 | yars-1 | C44B11.1.1 | Y105E8A.19.1 | Uncharacterized protein. | Tyrosine--tRNA ligase. | 0.468 |
C44B11.1 | zip-1 | C44B11.1.1 | Y75B8A.35a.2 | Uncharacterized protein. | BZIP transcription factor family. | 0.699 |
algn-2 | C44B11.1 | F09E5.2.1 | C44B11.1.1 | Asparagine Linked Glycosylation (ALG) homolog, Nematode. | Uncharacterized protein. | 0.918 |
algn-2 | rpl-7A | F09E5.2.1 | Y24D9A.4a.1 | Asparagine Linked Glycosylation (ALG) homolog, Nematode. | 60S ribosomal protein L7a; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.816 |
algn-2 | smg-2 | F09E5.2.1 | Y48G8AL.6.2 | Asparagine Linked Glycosylation (ALG) homolog, Nematode. | Regulator of nonsense transcripts 1; RNA-dependent helicase and ATPase required for nonsense- mediated decay (NMD) of mRNAs containing premature stop codons. Is recruited to mRNAs upon translation termination and undergoes a cycle of phosphorylation and dephosphorylation; its phosphorylation appears to be a key step in NMD. The formation of an smg-2-3-4 surveillance complex is believed to activate NMD (By similarity). | 0.662 |
algn-2 | yars-1 | F09E5.2.1 | Y105E8A.19.1 | Asparagine Linked Glycosylation (ALG) homolog, Nematode. | Tyrosine--tRNA ligase. | 0.477 |
algn-2 | zip-1 | F09E5.2.1 | Y75B8A.35a.2 | Asparagine Linked Glycosylation (ALG) homolog, Nematode. | BZIP transcription factor family. | 0.699 |
eef-1G | C44B11.1 | F17C11.9a.1 | C44B11.1.1 | Probable elongation factor 1-gamma; Probably plays a role in anchoring the complex to other cellular components. | Uncharacterized protein. | 0.546 |
eef-1G | fah-1 | F17C11.9a.1 | K10C2.4.2 | Probable elongation factor 1-gamma; Probably plays a role in anchoring the complex to other cellular components. | Fumarylacetoacetase. | 0.607 |
eef-1G | pyk-1 | F17C11.9a.1 | F25H5.3e.1 | Probable elongation factor 1-gamma; Probably plays a role in anchoring the complex to other cellular components. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.426 |
eef-1G | pyk-2 | F17C11.9a.1 | ZK593.1a.1 | Probable elongation factor 1-gamma; Probably plays a role in anchoring the complex to other cellular components. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.401 |
eef-1G | rpl-7A | F17C11.9a.1 | Y24D9A.4a.1 | Probable elongation factor 1-gamma; Probably plays a role in anchoring the complex to other cellular components. | 60S ribosomal protein L7a; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.992 |
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