STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dhs-18DeHydrogenases, Short chain. (293 aa)    
Predicted Functional Partners:
pks-1
PolyKetide Synthase.
  
 0.840
maoc-1
MAO-C-like dehydratase domain.
  
 0.758
ech-8
Enoyl-CoA Hydratase.
  
 0.747
B0272.4
Uncharacterized protein B0272.4.
  
 0.744
dhs-28
SCP2 domain-containing protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
0.740
cyp-25A1
CYtochrome P450 family; Belongs to the cytochrome P450 family.
   
 
 0.721
acox-3
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.720
acox-1.1
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.718
acds-10
ACaD (ACAD, acyl-CoA Dehydrogenase) Sequence homolog.
  
 0.716
acs-7
Fatty Acid CoA Synthetase family.
  
 0.710
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.