Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| col-2 | cut-1 | W01B6.7.1 | C47G2.1.1 | Cuticle collagen 2; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | Cuticlin-1; Component of the cuticles. It forms a ribbon approximately 2 microns wide running along the lateral lines underneath the alae. Contributes to the formation of extracellular envelopes protecting the organism from the environment. | 0.612 |
| col-2 | grl-23 | W01B6.7.1 | E02A10.2a.1 | Cuticle collagen 2; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | GRound-Like (Grd related). | 0.547 |
| col-2 | grl-25 | W01B6.7.1 | ZK643.8a.1 | Cuticle collagen 2; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | GRound-Like (Grd related). | 0.418 |
| col-36 | cut-1 | C27H5.5c.1 | C47G2.1.1 | Cuticle collagen 36; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | Cuticlin-1; Component of the cuticles. It forms a ribbon approximately 2 microns wide running along the lateral lines underneath the alae. Contributes to the formation of extracellular envelopes protecting the organism from the environment. | 0.817 |
| col-36 | grd-4 | C27H5.5c.1 | T01B10.1.1 | Cuticle collagen 36; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | Ground-like domain-containing protein. | 0.825 |
| col-36 | grl-20 | C27H5.5c.1 | C23H5.9.1 | Cuticle collagen 36; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | Ground-like domain-containing protein. | 0.849 |
| cut-1 | col-2 | C47G2.1.1 | W01B6.7.1 | Cuticlin-1; Component of the cuticles. It forms a ribbon approximately 2 microns wide running along the lateral lines underneath the alae. Contributes to the formation of extracellular envelopes protecting the organism from the environment. | Cuticle collagen 2; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | 0.612 |
| cut-1 | col-36 | C47G2.1.1 | C27H5.5c.1 | Cuticlin-1; Component of the cuticles. It forms a ribbon approximately 2 microns wide running along the lateral lines underneath the alae. Contributes to the formation of extracellular envelopes protecting the organism from the environment. | Cuticle collagen 36; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | 0.817 |
| cut-1 | cut-2 | C47G2.1.1 | F53F1.5.2 | Cuticlin-1; Component of the cuticles. It forms a ribbon approximately 2 microns wide running along the lateral lines underneath the alae. Contributes to the formation of extracellular envelopes protecting the organism from the environment. | Cuticlin-2; Component of the insoluble part of the cuticles. | 0.892 |
| cut-1 | cutl-17 | C47G2.1.1 | F38E11.4.1 | Cuticlin-1; Component of the cuticles. It forms a ribbon approximately 2 microns wide running along the lateral lines underneath the alae. Contributes to the formation of extracellular envelopes protecting the organism from the environment. | CUTiclin-Like. | 0.754 |
| cut-1 | dex-1 | C47G2.1.1 | D1044.2c.1 | Cuticlin-1; Component of the cuticles. It forms a ribbon approximately 2 microns wide running along the lateral lines underneath the alae. Contributes to the formation of extracellular envelopes protecting the organism from the environment. | Dendrite extension defective protein 1; Along with dyf-7, enables neurite growth and maintenance by anchoring amphid dendritic tips during neuron cell body migration in embryonic and larval development. | 0.660 |
| cut-1 | grd-4 | C47G2.1.1 | T01B10.1.1 | Cuticlin-1; Component of the cuticles. It forms a ribbon approximately 2 microns wide running along the lateral lines underneath the alae. Contributes to the formation of extracellular envelopes protecting the organism from the environment. | Ground-like domain-containing protein. | 0.555 |
| cut-1 | grl-20 | C47G2.1.1 | C23H5.9.1 | Cuticlin-1; Component of the cuticles. It forms a ribbon approximately 2 microns wide running along the lateral lines underneath the alae. Contributes to the formation of extracellular envelopes protecting the organism from the environment. | Ground-like domain-containing protein. | 0.771 |
| cut-1 | grl-23 | C47G2.1.1 | E02A10.2a.1 | Cuticlin-1; Component of the cuticles. It forms a ribbon approximately 2 microns wide running along the lateral lines underneath the alae. Contributes to the formation of extracellular envelopes protecting the organism from the environment. | GRound-Like (Grd related). | 0.589 |
| cut-1 | grl-25 | C47G2.1.1 | ZK643.8a.1 | Cuticlin-1; Component of the cuticles. It forms a ribbon approximately 2 microns wide running along the lateral lines underneath the alae. Contributes to the formation of extracellular envelopes protecting the organism from the environment. | GRound-Like (Grd related). | 0.526 |
| cut-1 | rocf-1 | C47G2.1.1 | T23F1.5.1 | Cuticlin-1; Component of the cuticles. It forms a ribbon approximately 2 microns wide running along the lateral lines underneath the alae. Contributes to the formation of extracellular envelopes protecting the organism from the environment. | ZP domain-containing protein. | 0.819 |
| cut-2 | cut-1 | F53F1.5.2 | C47G2.1.1 | Cuticlin-2; Component of the insoluble part of the cuticles. | Cuticlin-1; Component of the cuticles. It forms a ribbon approximately 2 microns wide running along the lateral lines underneath the alae. Contributes to the formation of extracellular envelopes protecting the organism from the environment. | 0.892 |
| cutl-17 | cut-1 | F38E11.4.1 | C47G2.1.1 | CUTiclin-Like. | Cuticlin-1; Component of the cuticles. It forms a ribbon approximately 2 microns wide running along the lateral lines underneath the alae. Contributes to the formation of extracellular envelopes protecting the organism from the environment. | 0.754 |
| dex-1 | cut-1 | D1044.2c.1 | C47G2.1.1 | Dendrite extension defective protein 1; Along with dyf-7, enables neurite growth and maintenance by anchoring amphid dendritic tips during neuron cell body migration in embryonic and larval development. | Cuticlin-1; Component of the cuticles. It forms a ribbon approximately 2 microns wide running along the lateral lines underneath the alae. Contributes to the formation of extracellular envelopes protecting the organism from the environment. | 0.660 |
| grd-4 | col-36 | T01B10.1.1 | C27H5.5c.1 | Ground-like domain-containing protein. | Cuticle collagen 36; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | 0.825 |
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