STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C48E7.7Uncharacterized protein. (152 aa)    
Predicted Functional Partners:
spch-2
SPerm CHromatin enriched.
   
    0.999
msp-50
Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142.
   
    0.999
gipc-1
PDZ domain-containing protein.
   
    0.999
F58A6.9
Major Sperm Protein.
   
    0.999
R09E10.6
Uncharacterized protein.
   
    0.999
spch-3
SPerm CHromatin enriched.
   
    0.999
msrp-2
MS Related Protein.
   
    0.999
nspd-1
Nematode Specific Peptide family, group D.
   
    0.999
sss-1
Sperm-Specific family, class S.
   
    0.990
msp-142
Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142.
   
    0.990
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.