STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
snf-9Transporter. (713 aa)    
Predicted Functional Partners:
B0361.4
Uncharacterized protein B0361.4.
      
 0.971
B0205.4
L-Fucosyltransferase; Belongs to the glycosyltransferase 11 family.
  
  
 0.892
cec-1
Chromo domain-containing protein cec-1.
      
 0.742
aex-3
MAP kinase-activating death domain protein; Plays a novel and significant role in regulating cell proliferation, survival and death through alternative mRNA splicing. Plays an important regulatory role in physiological cell death, caspase-mediated apoptosis (By similarity). Converts GDP-bound inactive form of rab-3 and cab-1 to the GTP-bound active forms. Regulator of presynaptic activity that interacts with rab-3 to regulate synaptic vesicle release. Is also a regulator of the cab-1 synaptic transmission pathway. Probably by converting rab-3 to its GTP-bound active form, plays a role [...]
      
 0.691
unc-24
PHB domain-containing protein.
   
  
 0.668
W09C3.7
Uncharacterized protein.
   
    0.536
ssp-10
Sperm-specific class P protein 10.
   
    0.489
Y69E1A.2
Uncharacterized protein.
   
    0.452
Y69E1A.1
Uncharacterized protein.
   
    0.449
C10G11.8
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
  
 0.445
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.