STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C49C8.5Fibrinogen C-terminal domain-containing protein. (451 aa)    
Predicted Functional Partners:
clec-83
C-type lectin domain-containing protein.
   
 
 0.820
Y54G2A.37
C-type lectin domain-containing protein.
    
 
 0.770
fbxa-59
F-box domain-containing protein.
   
  
 0.769
fbxa-157
F-box domain-containing protein.
   
  
 0.766
T19D12.4
VWFA domain-containing protein.
   
  
 0.761
F54E2.1
Uncharacterized protein.
   
  
 0.745
H02F09.3
Uncharacterized protein.
   
 
 0.728
clec-264
C-type LECtin.
    
 
 0.720
fbxa-60
F-box domain-containing protein.
   
  
 0.716
T25D10.1
Uncharacterized protein T25D10.1.
   
  
 0.716
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.