STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
col-138Col_cuticle_N domain-containing protein. (281 aa)    
Predicted Functional Partners:
dao-4
Dauer or Aging adult Overexpression.
   
  
 0.836
col-38
Col_cuticle_N domain-containing protein.
  
  
0.810
col-71
Col_cuticle_N domain-containing protein.
  
  
0.740
col-49
Col_cuticle_N domain-containing protein.
  
  
0.733
T07G12.3
Uncharacterized protein.
   
 
 0.724
Y69E1A.2
Uncharacterized protein.
   
  
 0.723
col-63
Col_cuticle_N domain-containing protein.
  
  
0.705
F09E10.7
DUF4440 domain-containing protein.
      
 0.697
col-175
Col_cuticle_N domain-containing protein.
  
   
0.695
C18A11.4
Uncharacterized protein.
      
 0.692
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.