Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| R04A9.7 | skr-7 | R04A9.7.1 | Y47D7A.1.1 | Uncharacterized protein; Belongs to the protein kinase superfamily. | SKp1 Related (Ubiquitin ligase complex component); Belongs to the SKP1 family. | 0.795 |
| R04A9.7 | skr-8 | R04A9.7.1 | C52D10.9.1 | Uncharacterized protein; Belongs to the protein kinase superfamily. | SKp1 Related (Ubiquitin ligase complex component); Belongs to the SKP1 family. | 0.809 |
| R04A9.7 | skr-9 | R04A9.7.1 | C52D10.7.1 | Uncharacterized protein; Belongs to the protein kinase superfamily. | SKp1 Related (Ubiquitin ligase complex component); Belongs to the SKP1 family. | 0.810 |
| cul-1 | cul-6 | D2045.6.1 | K08E7.7a.1 | Cullin-1; Probable core component of multiple cullin-RING-based SCF (SKP1-CUL1-F-box) E3 ubiquitin-protein ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. As a scaffold protein may contribute to catalysis through positioning of the substrate and the ubiquitin-conjugating enzyme. Required for developmentally programmed transitions from the G1 phase of the cell cycle to the G0 phase or the apoptotic pathway. | Cullin-6; Probable core component of cullin-based SCF-like E3 ubiquitin-protein ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. | 0.907 |
| cul-1 | lin-23 | D2045.6.1 | K10B2.1b.2 | Cullin-1; Probable core component of multiple cullin-RING-based SCF (SKP1-CUL1-F-box) E3 ubiquitin-protein ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. As a scaffold protein may contribute to catalysis through positioning of the substrate and the ubiquitin-conjugating enzyme. Required for developmentally programmed transitions from the G1 phase of the cell cycle to the G0 phase or the apoptotic pathway. | F-box/WD repeat-containing protein lin-23; Functions cell autonomously to negatively regulate cell cycle progression. Required to restrain cell proliferation in response to developmental cues. Probably recognizes and binds to some proteins and promotes their ubiquitination and degradation (By similarity). | 0.989 |
| cul-1 | rbx-1 | D2045.6.1 | ZK287.5.2 | Cullin-1; Probable core component of multiple cullin-RING-based SCF (SKP1-CUL1-F-box) E3 ubiquitin-protein ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. As a scaffold protein may contribute to catalysis through positioning of the substrate and the ubiquitin-conjugating enzyme. Required for developmentally programmed transitions from the G1 phase of the cell cycle to the G0 phase or the apoptotic pathway. | RING-box protein 1; Component of the SCF (SKP1-CUL1-F-box protein) E3 ubiquitin ligase complex, which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. Through the RING-type zinc finger, seems to recruit the E2 ubiquitination enzyme to the complex and brings it into close proximity to the substrate (By similarity). Essential for meiosis, mitotic chromosomal condensation and cytokinesis. Involved in histone H3 phosphorylation. | 0.999 |
| cul-1 | skr-7 | D2045.6.1 | Y47D7A.1.1 | Cullin-1; Probable core component of multiple cullin-RING-based SCF (SKP1-CUL1-F-box) E3 ubiquitin-protein ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. As a scaffold protein may contribute to catalysis through positioning of the substrate and the ubiquitin-conjugating enzyme. Required for developmentally programmed transitions from the G1 phase of the cell cycle to the G0 phase or the apoptotic pathway. | SKp1 Related (Ubiquitin ligase complex component); Belongs to the SKP1 family. | 0.998 |
| cul-1 | skr-8 | D2045.6.1 | C52D10.9.1 | Cullin-1; Probable core component of multiple cullin-RING-based SCF (SKP1-CUL1-F-box) E3 ubiquitin-protein ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. As a scaffold protein may contribute to catalysis through positioning of the substrate and the ubiquitin-conjugating enzyme. Required for developmentally programmed transitions from the G1 phase of the cell cycle to the G0 phase or the apoptotic pathway. | SKp1 Related (Ubiquitin ligase complex component); Belongs to the SKP1 family. | 0.997 |
| cul-1 | skr-9 | D2045.6.1 | C52D10.7.1 | Cullin-1; Probable core component of multiple cullin-RING-based SCF (SKP1-CUL1-F-box) E3 ubiquitin-protein ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. As a scaffold protein may contribute to catalysis through positioning of the substrate and the ubiquitin-conjugating enzyme. Required for developmentally programmed transitions from the G1 phase of the cell cycle to the G0 phase or the apoptotic pathway. | SKp1 Related (Ubiquitin ligase complex component); Belongs to the SKP1 family. | 0.997 |
| cul-6 | cul-1 | K08E7.7a.1 | D2045.6.1 | Cullin-6; Probable core component of cullin-based SCF-like E3 ubiquitin-protein ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. | Cullin-1; Probable core component of multiple cullin-RING-based SCF (SKP1-CUL1-F-box) E3 ubiquitin-protein ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. As a scaffold protein may contribute to catalysis through positioning of the substrate and the ubiquitin-conjugating enzyme. Required for developmentally programmed transitions from the G1 phase of the cell cycle to the G0 phase or the apoptotic pathway. | 0.907 |
| cul-6 | lin-23 | K08E7.7a.1 | K10B2.1b.2 | Cullin-6; Probable core component of cullin-based SCF-like E3 ubiquitin-protein ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. | F-box/WD repeat-containing protein lin-23; Functions cell autonomously to negatively regulate cell cycle progression. Required to restrain cell proliferation in response to developmental cues. Probably recognizes and binds to some proteins and promotes their ubiquitination and degradation (By similarity). | 0.922 |
| cul-6 | rbx-1 | K08E7.7a.1 | ZK287.5.2 | Cullin-6; Probable core component of cullin-based SCF-like E3 ubiquitin-protein ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. | RING-box protein 1; Component of the SCF (SKP1-CUL1-F-box protein) E3 ubiquitin ligase complex, which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. Through the RING-type zinc finger, seems to recruit the E2 ubiquitination enzyme to the complex and brings it into close proximity to the substrate (By similarity). Essential for meiosis, mitotic chromosomal condensation and cytokinesis. Involved in histone H3 phosphorylation. | 0.999 |
| cul-6 | skr-7 | K08E7.7a.1 | Y47D7A.1.1 | Cullin-6; Probable core component of cullin-based SCF-like E3 ubiquitin-protein ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. | SKp1 Related (Ubiquitin ligase complex component); Belongs to the SKP1 family. | 0.994 |
| cul-6 | skr-8 | K08E7.7a.1 | C52D10.9.1 | Cullin-6; Probable core component of cullin-based SCF-like E3 ubiquitin-protein ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. | SKp1 Related (Ubiquitin ligase complex component); Belongs to the SKP1 family. | 0.994 |
| cul-6 | skr-9 | K08E7.7a.1 | C52D10.7.1 | Cullin-6; Probable core component of cullin-based SCF-like E3 ubiquitin-protein ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. | SKp1 Related (Ubiquitin ligase complex component); Belongs to the SKP1 family. | 0.994 |
| dsl-2 | pes-2.1 | W09G12.1.1 | F56G4.2.1 | Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. | F-box domain-containing protein. | 0.592 |
| dsl-2 | sdz-33 | W09G12.1.1 | Y56A3A.14.1 | Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. | FBA_2 domain-containing protein. | 0.456 |
| dsl-2 | skr-7 | W09G12.1.1 | Y47D7A.1.1 | Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. | SKp1 Related (Ubiquitin ligase complex component); Belongs to the SKP1 family. | 0.818 |
| dsl-2 | skr-8 | W09G12.1.1 | C52D10.9.1 | Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. | SKp1 Related (Ubiquitin ligase complex component); Belongs to the SKP1 family. | 0.615 |
| dsl-2 | skr-9 | W09G12.1.1 | C52D10.7.1 | Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. | SKp1 Related (Ubiquitin ligase complex component); Belongs to the SKP1 family. | 0.644 |
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