Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C53B4.4 | Y57G7A.5 | C53B4.4b.1 | Y57G7A.5.1 | Uncharacterized protein. | Uncharacterized protein. | 0.550 |
C53B4.4 | col-119 | C53B4.4b.1 | C53B4.5.1 | Uncharacterized protein. | Col_cuticle_N domain-containing protein. | 0.741 |
Y57G7A.5 | C53B4.4 | Y57G7A.5.1 | C53B4.4b.1 | Uncharacterized protein. | Uncharacterized protein. | 0.550 |
Y57G7A.5 | col-119 | Y57G7A.5.1 | C53B4.5.1 | Uncharacterized protein. | Col_cuticle_N domain-containing protein. | 0.813 |
col-119 | C53B4.4 | C53B4.5.1 | C53B4.4b.1 | Col_cuticle_N domain-containing protein. | Uncharacterized protein. | 0.741 |
col-119 | Y57G7A.5 | C53B4.5.1 | Y57G7A.5.1 | Col_cuticle_N domain-containing protein. | Uncharacterized protein. | 0.813 |
col-119 | col-122 | C53B4.5.1 | T05A1.2.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.937 |
col-119 | col-124 | C53B4.5.1 | C24F3.6.2 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.711 |
col-119 | col-140 | C53B4.5.1 | F26F12.1.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.984 |
col-119 | col-178 | C53B4.5.1 | C34F6.2.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.999 |
col-119 | col-181 | C53B4.5.1 | W03G11.1a.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.999 |
col-119 | col-19 | C53B4.5.1 | ZK1193.1.1 | Col_cuticle_N domain-containing protein. | Cuticle collagen 19; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | 0.695 |
col-119 | col-20 | C53B4.5.1 | F11G11.11.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.999 |
col-119 | col-37 | C53B4.5.1 | ZK863.2.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.853 |
col-122 | col-119 | T05A1.2.1 | C53B4.5.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.937 |
col-122 | col-124 | T05A1.2.1 | C24F3.6.2 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.600 |
col-122 | col-140 | T05A1.2.1 | F26F12.1.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.997 |
col-122 | col-178 | T05A1.2.1 | C34F6.2.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.999 |
col-122 | col-181 | T05A1.2.1 | W03G11.1a.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.999 |
col-122 | col-19 | T05A1.2.1 | ZK1193.1.1 | Col_cuticle_N domain-containing protein. | Cuticle collagen 19; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | 0.818 |
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