STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C55A6.6Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (250 aa)    
Predicted Functional Partners:
C07D8.6
Aldo_ket_red domain-containing protein.
      
 0.815
F56A4.4
GST N-terminal domain-containing protein.
      
 0.805
dhs-8
DeHydrogenases, Short chain.
   
 
 0.752
T08H10.1
Aldo_ket_red domain-containing protein.
      
 0.747
F25D1.5
Uncharacterized protein.
   
  
 0.716
gsto-2
Probable glutathione transferase omega-2; Exhibits glutathione-dependent thiol transferase activity. Has dehydroascorbate reductase activity and may contribute to the recycling of ascorbic acid. Participates in the biotransformation of inorganic arsenic and reduces monomethylarsonic acid (MMA) (By similarity); Belongs to the GST superfamily. Omega family.
   
  
 0.712
dhs-23
DeHydrogenases, Short chain.
      
 0.698
ugt-16
UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family.
   
  
 0.694
sdz-8
SKN-1 Dependent Zygotic transcript.
  
   
0.545
ugt-50
Putative UDP-glucuronosyltransferase ugt-50.
   
  
 0.540
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.