STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C55B6.1FGGY_C domain-containing protein. (523 aa)    
Predicted Functional Partners:
F46H5.2
Uncharacterized protein.
   
  
 0.911
lron-7
LRRCT domain-containing protein.
    
 
 0.910
ZK867.2
Lig_chan-Glu_bd domain-containing protein.
      
 0.909
spp-22
SaPosin-like Protein family.
      
 0.909
Y50E8A.6
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
 0.865
T25G3.4
Probable glycerol-3-phosphate dehydrogenase, mitochondrial.
 
 0.825
dnj-7
DNaJ domain (Prokaryotic heat shock protein).
    
 
 0.815
syd-9
C2H2-type domain-containing protein.
    
 
 0.754
rpt-4
Probable 26S proteasome regulatory subunit 10B; The 26S proteasome is involved in the ATP-dependent degradation of ubiquitinated proteins. The regulatory (or ATPase) complex confers ATP dependency and substrate specificity to the 26S complex (By similarity).
  
 
 0.720
tag-294
RanBP2-type domain-containing protein.
   
 
 0.717
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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