STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vps-32.1Related to yeast Vacuolar Protein Sorting factor. (221 aa)    
Predicted Functional Partners:
alx-1
Apoptosis-linked gene 2-interacting protein X 1; Required for lin-12 degradation after it has been internalised in the vulval precursor cells.
   
 0.992
vps-2
Related to yeast Vacuolar Protein Sorting factor.
   
 0.986
vps-24
Related to yeast Vacuolar Protein Sorting factor.
   
 0.985
did-2
Doa4-Independent Degradation, homologous to yeast Did2.
   
 0.982
vps-20
Related to yeast Vacuolar Protein Sorting factor.
   
0.969
T24B8.2
Charged Multivesicular Body Protein homolog.
   
0.966
vps-4
Related to yeast Vacuolar Protein Sorting factor; Belongs to the AAA ATPase family.
   
 0.966
vps-60
Related to yeast Vacuolar Protein Sorting factor.
   
 
0.944
R12C12.5
Uncharacterized protein.
  
 
 
0.909
Y37H9A.3
Coiled-coil and C2 domain-containing protein 1-like; Belongs to the CC2D1 family.
   
 0.905
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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