Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C52B11.5 | C56E6.2 | C52B11.5.1 | C56E6.2.1 | Uncharacterized protein. | Uncharacterized protein. | 0.629 |
C52B11.5 | T04C9.1 | C52B11.5.1 | T04C9.1a.1 | Uncharacterized protein. | Uncharacterized protein. | 0.660 |
C52B11.5 | gdi-1 | C52B11.5.1 | Y57G11C.10b.1 | Uncharacterized protein. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.843 |
C52B11.5 | ssr-2 | C52B11.5.1 | C14A11.7.1 | Uncharacterized protein. | Sperm-Specific family, class R. | 0.711 |
C52B11.5 | vps-33.1 | C52B11.5.1 | B0303.9.1 | Uncharacterized protein. | Vacuolar protein sorting-associated protein 33A; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways. Believed to act as a component of the putative HOPS endosomal tethering complex which is proposed to be involved in the rab-5-to-rab-7 endosome conversion probably implicating sand-1, and via binding SNAREs and SNARE complexes to mediate tethering and docking events during SNARE- mediated membrane fusion. The HOPS complex is proposed to be recruited to rab-7 on the late endosomal membrane and to regulate lat [...] | 0.558 |
C52B11.5 | vps-33.2 | C52B11.5.1 | C56C10.1.1 | Uncharacterized protein. | Vacuolar protein sorting-associated protein 33B; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments and in membrane docking/fusion reactions of late endosomes/lysosomes. Believed to act as a component of the putative CORVET endosomal tethering complex which is proposed to be involved in the rab-5-to-rab-7 endosome conversion probably implicating sand-1, and via binding SNAREs and SNARE complexes to mediate tethering and docking events during SNARE-mediated membrane fusion. The CORVET complex is proposed to function as a rab-5 effector to mediate early endoso [...] | 0.558 |
C56E6.2 | C52B11.5 | C56E6.2.1 | C52B11.5.1 | Uncharacterized protein. | Uncharacterized protein. | 0.629 |
C56E6.2 | R06F6.8 | C56E6.2.1 | R06F6.8b.1 | Uncharacterized protein. | Guanine nucleotide exchange factor subunit R06F6.8; Probable component of a guanine nucleotide exchange factor (GEF) that may be required for efficient fusion of endosome-derived vesicles with the Golgi; Belongs to the RIC1 family. | 0.573 |
C56E6.2 | T04C9.1 | C56E6.2.1 | T04C9.1a.1 | Uncharacterized protein. | Uncharacterized protein. | 0.660 |
C56E6.2 | ZK669.5 | C56E6.2.1 | ZK669.5a.1 | Uncharacterized protein. | Uncharacterized protein. | 0.699 |
C56E6.2 | arl-1 | C56E6.2.1 | F54C9.10.2 | Uncharacterized protein. | ADP-ribosylation factor-like protein 1; GTP-binding protein that may be involved in protein trafficking; may modulate vesicle budding and uncoating within the Golgi apparatus. Plays a role in male tail tip morphogenesis. | 0.569 |
C56E6.2 | gdi-1 | C56E6.2.1 | Y57G11C.10b.1 | Uncharacterized protein. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.722 |
C56E6.2 | ssr-2 | C56E6.2.1 | C14A11.7.1 | Uncharacterized protein. | Sperm-Specific family, class R. | 0.733 |
C56E6.2 | tbc-13 | C56E6.2.1 | F45E6.3.1 | Uncharacterized protein. | Rab-GAP TBC domain-containing protein. | 0.617 |
C56E6.2 | vps-33.1 | C56E6.2.1 | B0303.9.1 | Uncharacterized protein. | Vacuolar protein sorting-associated protein 33A; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways. Believed to act as a component of the putative HOPS endosomal tethering complex which is proposed to be involved in the rab-5-to-rab-7 endosome conversion probably implicating sand-1, and via binding SNAREs and SNARE complexes to mediate tethering and docking events during SNARE- mediated membrane fusion. The HOPS complex is proposed to be recruited to rab-7 on the late endosomal membrane and to regulate lat [...] | 0.599 |
C56E6.2 | vps-33.2 | C56E6.2.1 | C56C10.1.1 | Uncharacterized protein. | Vacuolar protein sorting-associated protein 33B; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments and in membrane docking/fusion reactions of late endosomes/lysosomes. Believed to act as a component of the putative CORVET endosomal tethering complex which is proposed to be involved in the rab-5-to-rab-7 endosome conversion probably implicating sand-1, and via binding SNAREs and SNARE complexes to mediate tethering and docking events during SNARE-mediated membrane fusion. The CORVET complex is proposed to function as a rab-5 effector to mediate early endoso [...] | 0.597 |
R06F6.8 | C56E6.2 | R06F6.8b.1 | C56E6.2.1 | Guanine nucleotide exchange factor subunit R06F6.8; Probable component of a guanine nucleotide exchange factor (GEF) that may be required for efficient fusion of endosome-derived vesicles with the Golgi; Belongs to the RIC1 family. | Uncharacterized protein. | 0.573 |
R06F6.8 | gdi-1 | R06F6.8b.1 | Y57G11C.10b.1 | Guanine nucleotide exchange factor subunit R06F6.8; Probable component of a guanine nucleotide exchange factor (GEF) that may be required for efficient fusion of endosome-derived vesicles with the Golgi; Belongs to the RIC1 family. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.460 |
T04C9.1 | C52B11.5 | T04C9.1a.1 | C52B11.5.1 | Uncharacterized protein. | Uncharacterized protein. | 0.660 |
T04C9.1 | C56E6.2 | T04C9.1a.1 | C56E6.2.1 | Uncharacterized protein. | Uncharacterized protein. | 0.660 |
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