STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D2021.4Uncharacterized protein. (294 aa)    
Predicted Functional Partners:
ech-8
Enoyl-CoA Hydratase.
  
 
 0.555
B0272.4
Uncharacterized protein B0272.4.
  
 
 0.531
ech-4
ACB domain-containing protein.
  
 
 0.509
Y71F9B.9
Uncharacterized protein.
  
 
 0.473
B0272.3
Probable 3-hydroxyacyl-CoA dehydrogenase B0272.3; Belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
    
 0.467
F54C8.1
Probable 3-hydroxyacyl-CoA dehydrogenase F54C8.1; Belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
    
 0.467
hacd-1
Hydroxy-Acyl-CoA Dehydrogenase.
    
 0.467
hach-1
3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.438
C32E8.9
Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.436
ech-1.1
Enoyl-CoA Hydratase.
  
 
 0.434
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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