STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gbh-1Probable gamma-butyrobetaine dioxygenase; Catalyzes the formation of L-carnitine from gamma- butyrobetaine. (421 aa)    
Predicted Functional Partners:
gbh-2
Gamma Butyrobetaine Hydroxylase.
  
 
0.945
alh-11
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
   
 0.933
alh-1
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
   
 0.933
alh-2
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
   
 0.933
alh-12
Aldedh domain-containing protein.
   
 0.933
alh-4
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.929
alh-5
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.929
alh-9
Putative aldehyde dehydrogenase family 7 member A1 homolog; Belongs to the aldehyde dehydrogenase family.
   
 0.925
C31H2.4
Putative protein C31H2.4.
  
  
 0.862
T21F4.1
Uncharacterized protein; Belongs to the arginase family.
   
 
  0.790
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
Server load: low (22%) [HD]