E02H9.1 protein (Caenorhabditis elegans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

E02H9.1

Uncharacterized protein. (149 aa)

Predicted Functional Partners:

F13E9.10

0.541

F43C11.1

0.538

F18E9.7

0.497

C14F11.7

0.465

T26A8.3

0.463

F43C11.12

0.457

ZC328.5

0.455

Your Current Organism:

Caenorhabditis elegans

NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C14F11.7	E02H9.1	C14F11.7.1	E02H9.1.1	Uncharacterized protein.	Uncharacterized protein.	0.465
C14F11.7	F13E9.10	C14F11.7.1	F13E9.10.1	Uncharacterized protein.	DUF148 domain-containing protein.	0.549
C14F11.7	F18E9.7	C14F11.7.1	F18E9.7a.1	Uncharacterized protein.	Uncharacterized protein.	0.536
C14F11.7	F43C11.1	C14F11.7.1	F43C11.1b.1	Uncharacterized protein.	Uncharacterized protein.	0.457
C14F11.7	T26A8.3	C14F11.7.1	T26A8.3.1	Uncharacterized protein.	Uncharacterized protein.	0.615
C14F11.7	ZC328.5	C14F11.7.1	ZC328.5.1	Uncharacterized protein.	Uncharacterized protein.	0.538
E02H9.1	C14F11.7	E02H9.1.1	C14F11.7.1	Uncharacterized protein.	Uncharacterized protein.	0.465
E02H9.1	F13E9.10	E02H9.1.1	F13E9.10.1	Uncharacterized protein.	DUF148 domain-containing protein.	0.541
E02H9.1	F18E9.7	E02H9.1.1	F18E9.7a.1	Uncharacterized protein.	Uncharacterized protein.	0.497
E02H9.1	F43C11.1	E02H9.1.1	F43C11.1b.1	Uncharacterized protein.	Uncharacterized protein.	0.538
E02H9.1	F43C11.12	E02H9.1.1	F43C11.12.1	Uncharacterized protein.	Uncharacterized protein.	0.457
E02H9.1	T26A8.3	E02H9.1.1	T26A8.3.1	Uncharacterized protein.	Uncharacterized protein.	0.463
E02H9.1	ZC328.5	E02H9.1.1	ZC328.5.1	Uncharacterized protein.	Uncharacterized protein.	0.455
F13E9.10	C14F11.7	F13E9.10.1	C14F11.7.1	DUF148 domain-containing protein.	Uncharacterized protein.	0.549
F13E9.10	E02H9.1	F13E9.10.1	E02H9.1.1	DUF148 domain-containing protein.	Uncharacterized protein.	0.541
F13E9.10	F18E9.7	F13E9.10.1	F18E9.7a.1	DUF148 domain-containing protein.	Uncharacterized protein.	0.545
F13E9.10	F43C11.1	F13E9.10.1	F43C11.1b.1	DUF148 domain-containing protein.	Uncharacterized protein.	0.538
F13E9.10	F43C11.12	F13E9.10.1	F43C11.12.1	DUF148 domain-containing protein.	Uncharacterized protein.	0.407
F13E9.10	T26A8.3	F13E9.10.1	T26A8.3.1	DUF148 domain-containing protein.	Uncharacterized protein.	0.592
F13E9.10	ZC328.5	F13E9.10.1	ZC328.5.1	DUF148 domain-containing protein.	Uncharacterized protein.	0.502