Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| F23H11.2 | F33A8.4 | F23H11.2.1 | F33A8.4.1 | TATA box-binding protein-associated factor RNA polymerase I subunit B; Component of RNA polymerase I core factor complex that acts as a GTF2B/TFIIB-like factor and plays a key role in multiple steps during transcription initiation such as pre-initiation complex (PIC) assembly and postpolymerase recruitment events in polymerase I (Pol I) transcription. Binds rDNA promoters and plays a role in Pol I recruitment (By similarity). | Uncharacterized protein. | 0.851 |
| F23H11.2 | F52C9.3 | F23H11.2.1 | F52C9.3.1 | TATA box-binding protein-associated factor RNA polymerase I subunit B; Component of RNA polymerase I core factor complex that acts as a GTF2B/TFIIB-like factor and plays a key role in multiple steps during transcription initiation such as pre-initiation complex (PIC) assembly and postpolymerase recruitment events in polymerase I (Pol I) transcription. Binds rDNA promoters and plays a role in Pol I recruitment (By similarity). | Uncharacterized protein F52C9.3. | 0.565 |
| F23H11.2 | F58B3.4 | F23H11.2.1 | F58B3.4.1 | TATA box-binding protein-associated factor RNA polymerase I subunit B; Component of RNA polymerase I core factor complex that acts as a GTF2B/TFIIB-like factor and plays a key role in multiple steps during transcription initiation such as pre-initiation complex (PIC) assembly and postpolymerase recruitment events in polymerase I (Pol I) transcription. Binds rDNA promoters and plays a role in Pol I recruitment (By similarity). | NUC153 domain-containing protein. | 0.605 |
| F23H11.2 | dpf-4 | F23H11.2.1 | F01F1.5.1 | TATA box-binding protein-associated factor RNA polymerase I subunit B; Component of RNA polymerase I core factor complex that acts as a GTF2B/TFIIB-like factor and plays a key role in multiple steps during transcription initiation such as pre-initiation complex (PIC) assembly and postpolymerase recruitment events in polymerase I (Pol I) transcription. Binds rDNA promoters and plays a role in Pol I recruitment (By similarity). | Peptidase_S9 domain-containing protein. | 0.601 |
| F23H11.2 | elpc-1 | F23H11.2.1 | Y110A7A.16.1 | TATA box-binding protein-associated factor RNA polymerase I subunit B; Component of RNA polymerase I core factor complex that acts as a GTF2B/TFIIB-like factor and plays a key role in multiple steps during transcription initiation such as pre-initiation complex (PIC) assembly and postpolymerase recruitment events in polymerase I (Pol I) transcription. Binds rDNA promoters and plays a role in Pol I recruitment (By similarity). | Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family. | 0.607 |
| F23H11.2 | fars-3 | F23H11.2.1 | F22B5.9.1 | TATA box-binding protein-associated factor RNA polymerase I subunit B; Component of RNA polymerase I core factor complex that acts as a GTF2B/TFIIB-like factor and plays a key role in multiple steps during transcription initiation such as pre-initiation complex (PIC) assembly and postpolymerase recruitment events in polymerase I (Pol I) transcription. Binds rDNA promoters and plays a role in Pol I recruitment (By similarity). | Phenylalanine--tRNA ligase beta subunit. | 0.554 |
| F23H11.2 | isw-1 | F23H11.2.1 | F37A4.8.1 | TATA box-binding protein-associated factor RNA polymerase I subunit B; Component of RNA polymerase I core factor complex that acts as a GTF2B/TFIIB-like factor and plays a key role in multiple steps during transcription initiation such as pre-initiation complex (PIC) assembly and postpolymerase recruitment events in polymerase I (Pol I) transcription. Binds rDNA promoters and plays a role in Pol I recruitment (By similarity). | Chromatin-remodeling complex ATPase chain isw-1; Energy-transducing component of a NURF-like (nucleosome- remodeling factor-like) complex, which would catalyze ATP-dependent nucleosome sliding and facilitate transcription of chromatin (Probable). Involved in vulval cell fates. Belongs to the SNF2/RAD54 helicase family. ISWI subfamily. | 0.860 |
| F23H11.2 | mrpl-38 | F23H11.2.1 | Y34D9A.1.1 | TATA box-binding protein-associated factor RNA polymerase I subunit B; Component of RNA polymerase I core factor complex that acts as a GTF2B/TFIIB-like factor and plays a key role in multiple steps during transcription initiation such as pre-initiation complex (PIC) assembly and postpolymerase recruitment events in polymerase I (Pol I) transcription. Binds rDNA promoters and plays a role in Pol I recruitment (By similarity). | Mitochondrial Ribosomal Protein, Large. | 0.639 |
| F23H11.2 | prp-38 | F23H11.2.1 | D1054.14.1 | TATA box-binding protein-associated factor RNA polymerase I subunit B; Component of RNA polymerase I core factor complex that acts as a GTF2B/TFIIB-like factor and plays a key role in multiple steps during transcription initiation such as pre-initiation complex (PIC) assembly and postpolymerase recruitment events in polymerase I (Pol I) transcription. Binds rDNA promoters and plays a role in Pol I recruitment (By similarity). | Yeast PRP (Splicing factor) related. | 0.641 |
| F33A8.4 | F23H11.2 | F33A8.4.1 | F23H11.2.1 | Uncharacterized protein. | TATA box-binding protein-associated factor RNA polymerase I subunit B; Component of RNA polymerase I core factor complex that acts as a GTF2B/TFIIB-like factor and plays a key role in multiple steps during transcription initiation such as pre-initiation complex (PIC) assembly and postpolymerase recruitment events in polymerase I (Pol I) transcription. Binds rDNA promoters and plays a role in Pol I recruitment (By similarity). | 0.851 |
| F33A8.4 | F52C9.3 | F33A8.4.1 | F52C9.3.1 | Uncharacterized protein. | Uncharacterized protein F52C9.3. | 0.572 |
| F33A8.4 | F58B3.4 | F33A8.4.1 | F58B3.4.1 | Uncharacterized protein. | NUC153 domain-containing protein. | 0.627 |
| F33A8.4 | dpf-4 | F33A8.4.1 | F01F1.5.1 | Uncharacterized protein. | Peptidase_S9 domain-containing protein. | 0.599 |
| F33A8.4 | elpc-1 | F33A8.4.1 | Y110A7A.16.1 | Uncharacterized protein. | Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family. | 0.604 |
| F33A8.4 | fars-3 | F33A8.4.1 | F22B5.9.1 | Uncharacterized protein. | Phenylalanine--tRNA ligase beta subunit. | 0.590 |
| F33A8.4 | isw-1 | F33A8.4.1 | F37A4.8.1 | Uncharacterized protein. | Chromatin-remodeling complex ATPase chain isw-1; Energy-transducing component of a NURF-like (nucleosome- remodeling factor-like) complex, which would catalyze ATP-dependent nucleosome sliding and facilitate transcription of chromatin (Probable). Involved in vulval cell fates. Belongs to the SNF2/RAD54 helicase family. ISWI subfamily. | 0.846 |
| F33A8.4 | mrpl-38 | F33A8.4.1 | Y34D9A.1.1 | Uncharacterized protein. | Mitochondrial Ribosomal Protein, Large. | 0.846 |
| F33A8.4 | prp-38 | F33A8.4.1 | D1054.14.1 | Uncharacterized protein. | Yeast PRP (Splicing factor) related. | 0.846 |
| F52C9.3 | F23H11.2 | F52C9.3.1 | F23H11.2.1 | Uncharacterized protein F52C9.3. | TATA box-binding protein-associated factor RNA polymerase I subunit B; Component of RNA polymerase I core factor complex that acts as a GTF2B/TFIIB-like factor and plays a key role in multiple steps during transcription initiation such as pre-initiation complex (PIC) assembly and postpolymerase recruitment events in polymerase I (Pol I) transcription. Binds rDNA promoters and plays a role in Pol I recruitment (By similarity). | 0.565 |
| F52C9.3 | F33A8.4 | F52C9.3.1 | F33A8.4.1 | Uncharacterized protein F52C9.3. | Uncharacterized protein. | 0.572 |
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