STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptd-2SSD domain-containing protein. (936 aa)    
Predicted Functional Partners:
wrt-1
Warthog protein 1 C-product; Intercellular signal essential for a variety of patterning events during development.
    
 
 0.680
wrt-8
Warthog protein 8 C-product; Intercellular signal essential for a variety of patterning events during development.
    
 
 0.664
wrt-7
WaRThog (Hedgehog-like family).
    
 
 0.654
wrt-5
Warthog protein 5; Intercellular signal essential for a variety of patterning events during development.
    
 
 0.644
wrt-9
WaRThog (Hedgehog-like family).
    
 
 0.635
grd-11
GRounDhog (Hedgehog-like family).
    
 
 0.625
grd-1
GRounDhog (Hedgehog-like family).
    
 
 0.605
grd-2
GRounDhog (Hedgehog-like family).
    
 
 0.603
hog-1
HOG only (Hedgehog Hog domain alone).
   
 
 0.565
wrt-6
Warthog protein 6 C-product; Intercellular signal essential for a variety of patterning events during development; Belongs to the hedgehog family.
    
 
 0.555
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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