STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F07E5.5Uncharacterized protein. (384 aa)    
Predicted Functional Partners:
mtr-4
mRNA transport homolog 4.
   
 
 0.819
gld-4
Poly(A) RNA polymerase gld-4; Cytoplasmic poly(A) RNA polymerase that adds successive AMP monomers to the 3'-end of specific RNAs, forming a poly(A) tail. The enzymatic activity is enhanced by its interaction with gls-1. Required, together with gld-2, for early meiotic progression in male and female germ cells and for gld-1 protein accumulation in the hermaphrodite germline. In the germline, forms a complex with gls-1 which directly binds to gld-1 mRNA and prevents its degradation.
   
 
 0.793
Y17G7B.12
Exonuclease domain-containing protein.
   
   0.743
C53A5.2
Uncharacterized protein.
   
 
 0.632
byn-1
Uncharacterized protein byn-1; Belongs to the bystin family.
   
   0.621
C48B6.2
Putative 40S ribosomal protein S4-like.
   
 
 0.616
skih-2
SKI (Yeast SuperKIller) Helicase homolog.
   
 
 0.586
rbm-34
RNA Binding Motif protein homolog.
   
 
 0.574
Y54E10BR.4
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
   
    0.573
T23D8.3
Protein LTV1 homolog; Belongs to the LTV1 family.
   
   0.552
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.