STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dhs-25DeHydrogenases, Short chain. (248 aa)    
Predicted Functional Partners:
F10G8.9
PKS_KS domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 0.972
fasn-1
Carrier domain-containing protein.
  
 0.955
dhs-11
DeHydrogenases, Short chain.
  
  
0.905
pks-1
PolyKetide Synthase.
  
 0.862
acdh-2
Acyl CoA DeHydrogenase.
  
 0.852
C15A11.7
Uncharacterized protein.
      
 0.741
T21G5.1
Tyrosine-protein kinase.
    
 
 0.707
gska-3
Protein kinase domain-containing protein.
    
 
 0.705
ddn-1
Downstream of Daf-Nineteen.
   
 
 0.702
C09B8.4
Uncharacterized protein.
   
  
 0.699
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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