Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
afmd-1 | arx-3 | D2024.2.1 | Y79H2A.6b.1 | Abhydrolase_3 domain-containing protein. | Actin-related protein 2/3 complex subunit. | 0.846 |
afmd-1 | clec-89 | D2024.2.1 | C09D1.2.1 | Abhydrolase_3 domain-containing protein. | C-type LECtin. | 0.846 |
afmd-1 | crn-7 | D2024.2.1 | F09G8.2.1 | Abhydrolase_3 domain-containing protein. | Cell-death-related nuclease 7; Belongs to the DNase II family. | 0.846 |
afmd-1 | crp-1 | D2024.2.1 | Y32F6B.3.1 | Abhydrolase_3 domain-containing protein. | Cdc-42 Related Protein. | 0.603 |
afmd-1 | glrx-5 | D2024.2.1 | Y49E10.2.1 | Abhydrolase_3 domain-containing protein. | Glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily. | 0.829 |
afmd-1 | lev-1 | D2024.2.1 | F09E8.7a.1 | Abhydrolase_3 domain-containing protein. | Acetylcholine receptor subunit beta-type lev-1; Non-alpha subunit of nicotinic acetylcholine receptor (nAChR). Involved in nAChR sensitivity to nicotine. Belongs to the ligand-gated ion channel (TC 1.A.9) family. Acetylcholine receptor (TC 1.A.9.1) subfamily. | 0.584 |
afmd-1 | mdt-29 | D2024.2.1 | K08E3.8.1 | Abhydrolase_3 domain-containing protein. | Mediator of RNA polymerase II transcription subunit 29; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). | 0.615 |
afmd-1 | pssy-1 | D2024.2.1 | ZC506.3.3 | Abhydrolase_3 domain-containing protein. | PhosphatidylSerine SYnthase. | 0.633 |
arx-3 | afmd-1 | Y79H2A.6b.1 | D2024.2.1 | Actin-related protein 2/3 complex subunit. | Abhydrolase_3 domain-containing protein. | 0.846 |
arx-3 | clec-89 | Y79H2A.6b.1 | C09D1.2.1 | Actin-related protein 2/3 complex subunit. | C-type LECtin. | 0.846 |
arx-3 | crn-7 | Y79H2A.6b.1 | F09G8.2.1 | Actin-related protein 2/3 complex subunit. | Cell-death-related nuclease 7; Belongs to the DNase II family. | 0.853 |
arx-3 | crp-1 | Y79H2A.6b.1 | Y32F6B.3.1 | Actin-related protein 2/3 complex subunit. | Cdc-42 Related Protein. | 0.773 |
arx-3 | glrx-5 | Y79H2A.6b.1 | Y49E10.2.1 | Actin-related protein 2/3 complex subunit. | Glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily. | 0.846 |
arx-3 | lev-1 | Y79H2A.6b.1 | F09E8.7a.1 | Actin-related protein 2/3 complex subunit. | Acetylcholine receptor subunit beta-type lev-1; Non-alpha subunit of nicotinic acetylcholine receptor (nAChR). Involved in nAChR sensitivity to nicotine. Belongs to the ligand-gated ion channel (TC 1.A.9) family. Acetylcholine receptor (TC 1.A.9.1) subfamily. | 0.592 |
arx-3 | mdt-29 | Y79H2A.6b.1 | K08E3.8.1 | Actin-related protein 2/3 complex subunit. | Mediator of RNA polymerase II transcription subunit 29; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). | 0.851 |
arx-3 | pssy-1 | Y79H2A.6b.1 | ZC506.3.3 | Actin-related protein 2/3 complex subunit. | PhosphatidylSerine SYnthase. | 0.846 |
clec-89 | afmd-1 | C09D1.2.1 | D2024.2.1 | C-type LECtin. | Abhydrolase_3 domain-containing protein. | 0.846 |
clec-89 | arx-3 | C09D1.2.1 | Y79H2A.6b.1 | C-type LECtin. | Actin-related protein 2/3 complex subunit. | 0.846 |
clec-89 | crn-7 | C09D1.2.1 | F09G8.2.1 | C-type LECtin. | Cell-death-related nuclease 7; Belongs to the DNase II family. | 0.846 |
clec-89 | crp-1 | C09D1.2.1 | Y32F6B.3.1 | C-type LECtin. | Cdc-42 Related Protein. | 0.853 |
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