Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F10A3.1 | F49F1.5 | F10A3.1.1 | F49F1.5a.1 | Uncharacterized protein. | ShKT domain-containing protein. | 0.660 |
F10A3.1 | T02E1.7 | F10A3.1.1 | T02E1.7.1 | Uncharacterized protein. | Uncharacterized protein T02E1.7; Belongs to the SURF4 family. | 0.810 |
F10A3.1 | arf-1.1 | F10A3.1.1 | F45E4.1.1 | Uncharacterized protein. | ADP-ribosylation factor 1-like 1; GTP-binding protein that may be involved in protein trafficking; may modulate vesicle budding and uncoating within the Golgi apparatus; Belongs to the small GTPase superfamily. Arf family. | 0.660 |
F10A3.1 | clc-1 | F10A3.1.1 | C09F12.1.1 | Uncharacterized protein. | CLaudin-like in Caenorhabditis. | 0.699 |
F10A3.1 | dkf-2 | F10A3.1.1 | T25E12.4f.1 | Uncharacterized protein. | Serine/threonine-protein kinase dkf-2; Converts transient diacylglycerol (DAG) signals into prolonged physiological effects, downstream of PKC. Acts in the intestine to regulate both innate immunity by promoting activation of PMK-1 and also stress response and life span by acting as an upstream, negative regulator of the daf-16 transcription factor. Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. PKD subfamily. | 0.426 |
F10A3.1 | nhr-63 | F10A3.1.1 | C06C6.4.1 | Uncharacterized protein. | Nuclear Hormone Receptor family. | 0.461 |
F10A3.1 | sedl-1 | F10A3.1.1 | W05H7.3.1 | Uncharacterized protein. | Probable trafficking protein particle complex subunit 2; May play a role in vesicular transport from endoplasmic reticulum to Golgi. Required for the systemic spread of the RNAi response; Belongs to the TRAPP small subunits family. Sedlin subfamily. | 0.853 |
F10A3.1 | sft-4 | F10A3.1.1 | C54H2.5.1 | Uncharacterized protein. | Surfeit locus protein 4 homolog; Belongs to the SURF4 family. | 0.693 |
F10A3.1 | spp-9 | F10A3.1.1 | T25C12.2.1 | Uncharacterized protein. | Saposin B-type domain-containing protein. | 0.740 |
F10A3.1 | zoo-1 | F10A3.1.1 | Y105E8A.26a.1 | Uncharacterized protein. | ZO-1 (Zonula Occludens tight junctional protein) Ortholog. | 0.692 |
F49F1.5 | F10A3.1 | F49F1.5a.1 | F10A3.1.1 | ShKT domain-containing protein. | Uncharacterized protein. | 0.660 |
F49F1.5 | T02E1.7 | F49F1.5a.1 | T02E1.7.1 | ShKT domain-containing protein. | Uncharacterized protein T02E1.7; Belongs to the SURF4 family. | 0.507 |
F49F1.5 | dkf-2 | F49F1.5a.1 | T25E12.4f.1 | ShKT domain-containing protein. | Serine/threonine-protein kinase dkf-2; Converts transient diacylglycerol (DAG) signals into prolonged physiological effects, downstream of PKC. Acts in the intestine to regulate both innate immunity by promoting activation of PMK-1 and also stress response and life span by acting as an upstream, negative regulator of the daf-16 transcription factor. Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. PKD subfamily. | 0.468 |
F49F1.5 | nhr-63 | F49F1.5a.1 | C06C6.4.1 | ShKT domain-containing protein. | Nuclear Hormone Receptor family. | 0.477 |
F49F1.5 | sedl-1 | F49F1.5a.1 | W05H7.3.1 | ShKT domain-containing protein. | Probable trafficking protein particle complex subunit 2; May play a role in vesicular transport from endoplasmic reticulum to Golgi. Required for the systemic spread of the RNAi response; Belongs to the TRAPP small subunits family. Sedlin subfamily. | 0.665 |
T02E1.7 | F10A3.1 | T02E1.7.1 | F10A3.1.1 | Uncharacterized protein T02E1.7; Belongs to the SURF4 family. | Uncharacterized protein. | 0.810 |
T02E1.7 | F49F1.5 | T02E1.7.1 | F49F1.5a.1 | Uncharacterized protein T02E1.7; Belongs to the SURF4 family. | ShKT domain-containing protein. | 0.507 |
T02E1.7 | arf-1.1 | T02E1.7.1 | F45E4.1.1 | Uncharacterized protein T02E1.7; Belongs to the SURF4 family. | ADP-ribosylation factor 1-like 1; GTP-binding protein that may be involved in protein trafficking; may modulate vesicle budding and uncoating within the Golgi apparatus; Belongs to the small GTPase superfamily. Arf family. | 0.546 |
T02E1.7 | clc-1 | T02E1.7.1 | C09F12.1.1 | Uncharacterized protein T02E1.7; Belongs to the SURF4 family. | CLaudin-like in Caenorhabditis. | 0.663 |
T02E1.7 | sedl-1 | T02E1.7.1 | W05H7.3.1 | Uncharacterized protein T02E1.7; Belongs to the SURF4 family. | Probable trafficking protein particle complex subunit 2; May play a role in vesicular transport from endoplasmic reticulum to Golgi. Required for the systemic spread of the RNAi response; Belongs to the TRAPP small subunits family. Sedlin subfamily. | 0.850 |
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