STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acs-14Fatty Acid CoA Synthetase family. (544 aa)    
Predicted Functional Partners:
pks-1
PolyKetide Synthase.
  
 0.943
npp-11
Nuclear Pore complex Protein.
   
 
 0.906
dhs-6
SCP2 domain-containing protein.
  
 0.792
W06H8.2
Oxidored_FMN domain-containing protein.
    
 0.786
B0272.4
Uncharacterized protein B0272.4.
  
 0.782
dhs-28
SCP2 domain-containing protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.776
acds-10
ACaD (ACAD, acyl-CoA Dehydrogenase) Sequence homolog.
  
 0.770
clec-6
C-type LECtin.
    
 
 0.765
clec-160
C-type lectin domain-containing protein 160.
   
  
 0.758
maoc-1
MAO-C-like dehydratase domain.
  
 
 0.737
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.