Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F11E6.3 | Y22D7AL.16 | F11E6.3.2 | Y22D7AL.16.1 | Uncharacterized protein. | C2H2-type domain-containing protein. | 0.868 |
F11E6.3 | col-103 | F11E6.3.2 | F56B3.1.1 | Uncharacterized protein. | Col_cuticle_N domain-containing protein. | 0.615 |
F11E6.3 | col-160 | F11E6.3.2 | F57B1.4.3 | Uncharacterized protein. | Col_cuticle_N domain-containing protein. | 0.848 |
F11E6.3 | col-42 | F11E6.3.2 | Y69H2.14.1 | Uncharacterized protein. | Col_cuticle_N domain-containing protein. | 0.625 |
F11E6.3 | col-46 | F11E6.3.2 | Y18H1A.13.1 | Uncharacterized protein. | COLlagen. | 0.821 |
F11E6.3 | col-68 | F11E6.3.2 | C50D2.4.1 | Uncharacterized protein. | Col_cuticle_N domain-containing protein. | 0.927 |
F11E6.3 | col-80 | F11E6.3.2 | C09G5.5.1 | Uncharacterized protein. | Putative cuticle collagen 80; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | 0.590 |
F11E6.3 | col-98 | F11E6.3.2 | F14F7.1.1 | Uncharacterized protein. | Col_cuticle_N domain-containing protein. | 0.590 |
F11E6.3 | fbxb-69 | F11E6.3.2 | F09C3.5.1 | Uncharacterized protein. | FBA_2 domain-containing protein. | 0.856 |
F11E6.3 | qua-1 | F11E6.3.2 | T05C12.10.1 | Uncharacterized protein. | Protein qua-1; Required for cuticle shedding and normal alae morphology and localization, and subsequently larval development. | 0.584 |
Y22D7AL.16 | F11E6.3 | Y22D7AL.16.1 | F11E6.3.2 | C2H2-type domain-containing protein. | Uncharacterized protein. | 0.868 |
Y22D7AL.16 | fbxb-69 | Y22D7AL.16.1 | F09C3.5.1 | C2H2-type domain-containing protein. | FBA_2 domain-containing protein. | 0.893 |
col-103 | F11E6.3 | F56B3.1.1 | F11E6.3.2 | Col_cuticle_N domain-containing protein. | Uncharacterized protein. | 0.615 |
col-103 | col-160 | F56B3.1.1 | F57B1.4.3 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.881 |
col-103 | col-42 | F56B3.1.1 | Y69H2.14.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.578 |
col-103 | col-80 | F56B3.1.1 | C09G5.5.1 | Col_cuticle_N domain-containing protein. | Putative cuticle collagen 80; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | 0.650 |
col-103 | col-98 | F56B3.1.1 | F14F7.1.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.999 |
col-160 | F11E6.3 | F57B1.4.3 | F11E6.3.2 | Col_cuticle_N domain-containing protein. | Uncharacterized protein. | 0.848 |
col-160 | col-103 | F57B1.4.3 | F56B3.1.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.881 |
col-160 | col-42 | F57B1.4.3 | Y69H2.14.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.538 |
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