STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F13H8.2WD_REPEATS_REGION domain-containing protein. (929 aa)    
Predicted Functional Partners:
B0280.9
U3 small nucleolar RNA-associated protein 18 homolog; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the WD repeat UTP18 family.
   
 0.999
krr-1
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.999
wdr-46
WD_REPEATS_REGION domain-containing protein.
   
0.999
F55F8.3
Periodic tryptophan protein 2 homolog; Belongs to the WD repeat PWP2 family.
   
 0.999
T20B12.3
Uncharacterized protein T20B12.3; Belongs to the CBF/MAK21 family.
   
 0.999
Y45F10D.7
Uncharacterized protein.
  
 0.999
nol-6
Nucleolar protein 6.
   
 0.999
Y53C12B.1
WD_REPEATS_REGION domain-containing protein.
  
0.999
Y61A9LA.10
Bms1-type G domain-containing protein.
   
 0.999
utp-20
DRIM domain-containing protein.
   
 0.998
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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