STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ckb-4Choline Kinase B. (381 aa)    
Predicted Functional Partners:
pcp-2
Prolyl Carboxy Peptidase like.
   
  
 0.810
sulp-1
STAS domain-containing protein.
      
 0.809
sulp-6
STAS domain-containing protein.
      
 0.758
sulp-5
STAS domain-containing protein.
      
 0.692
slcf-1
SoLute Carrier Family.
      
 0.660
daf-15
Raptor_N domain-containing protein.
    
 
 0.598
ckc-1
Choline Kinase C.
  
 
0.565
sinh-1
Stress-activated map kinase-interacting protein 1 homolog; May interact with a MAP kinase. May act on Ras-regulated pathways (By similarity).
    
 
 0.537
Y19D10A.5
annotation not available
      
 0.530
pcyt-2.2
CTP_transf_like domain-containing protein.
   
 
 0.503
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.