STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F25E5.3Uncharacterized protein. (377 aa)    
Predicted Functional Partners:
F48E3.4
Peptidase S1 domain-containing protein.
      
 0.852
try-3
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
      
 0.758
try-1
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
      
 0.745
swm-1
Serine protease inhibitor swm-1; Serine protease inhibitor (Probable). Probably by inhibiting serine protease tyr-5 in males, prevents the maturation of spermatids into mature motile spermatozoa until their transfer into a hermaphrodite. Also required for efficient sperm transfer and thus for male fertility.
      
 0.697
try-5
Trypsin-like protease try-5; Serine protease which, in males, acts as a promoting signal during mating to activate sperm.
      
 0.693
F25E5.7
Uncharacterized protein.
   
  
0.668
C28C12.3
Uncharacterized protein C28C12.3; Belongs to the SXP/RAL-2 family.
   
   0.559
C49C3.11
C-type lectin domain-containing protein.
   
   0.554
clec-136
C-type LECtin.
   
   0.554
clec-137
C-type LECtin.
   
   0.554
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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