STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccdc-149Coiled-coil domain-containing protein 149; Belongs to the CCDC149 family. (369 aa)    
Predicted Functional Partners:
F55C12.4
Uncharacterized protein.
   
  
 0.703
insc-1
INSCuteable (Drososphila asymmetric cell division protein) homolog.
   
  
 0.700
tag-234
Uncharacterized protein.
      
 0.698
famh-161
Protein fam-161.
   
  
 0.696
tig-2
TGF_BETA_2 domain-containing protein.
   
  
 0.695
F39B2.8
G_PROTEIN_RECEP_F3_4 domain-containing protein.
   
  
 0.670
twk-30
TWiK family of potassium channels; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
   
  
 0.619
cfap-36
Cilia- and flagella-associated protein 36.
      
 0.610
maph-9
Protein maph-9.
   
  
 0.605
F09C3.2
Uncharacterized protein.
   
  
 0.589
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.