Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
gsy-1 | srr-3 | Y46G5A.31.1 | F36D3.3.1 | Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan; Belongs to the glycosyltransferase 3 family. | Serpentine Receptor, class R. | 0.741 |
peel-1 | srr-3 | Y39G10AR.25.1 | F36D3.3.1 | PEEL-1. | Serpentine Receptor, class R. | 0.540 |
peel-1 | zeel-1 | Y39G10AR.25.1 | Y39G10AR.5.1 | PEEL-1. | Uncharacterized protein. | 0.977 |
sar-1 | srr-3 | ZK180.4.1 | F36D3.3.1 | GTP-binding protein SAR1; Involved in transport from the endoplasmic reticulum to the Golgi apparatus; Belongs to the small GTPase superfamily. SAR1 family. | Serpentine Receptor, class R. | 0.733 |
srr-3 | gsy-1 | F36D3.3.1 | Y46G5A.31.1 | Serpentine Receptor, class R. | Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan; Belongs to the glycosyltransferase 3 family. | 0.741 |
srr-3 | peel-1 | F36D3.3.1 | Y39G10AR.25.1 | Serpentine Receptor, class R. | PEEL-1. | 0.540 |
srr-3 | sar-1 | F36D3.3.1 | ZK180.4.1 | Serpentine Receptor, class R. | GTP-binding protein SAR1; Involved in transport from the endoplasmic reticulum to the Golgi apparatus; Belongs to the small GTPase superfamily. SAR1 family. | 0.733 |
srr-3 | vab-10 | F36D3.3.1 | ZK1151.1l.1 | Serpentine Receptor, class R. | GAR domain-containing protein. | 0.664 |
srr-3 | vab-7 | F36D3.3.1 | M142.4.1 | Serpentine Receptor, class R. | Homeobox protein vab-7; Required for posterior-specific pattern formation in the embryo and may have a role in regulating egl-5 expression. | 0.674 |
srr-3 | zeel-1 | F36D3.3.1 | Y39G10AR.5.1 | Serpentine Receptor, class R. | Uncharacterized protein. | 0.697 |
vab-10 | srr-3 | ZK1151.1l.1 | F36D3.3.1 | GAR domain-containing protein. | Serpentine Receptor, class R. | 0.664 |
vab-7 | srr-3 | M142.4.1 | F36D3.3.1 | Homeobox protein vab-7; Required for posterior-specific pattern formation in the embryo and may have a role in regulating egl-5 expression. | Serpentine Receptor, class R. | 0.674 |
zeel-1 | peel-1 | Y39G10AR.5.1 | Y39G10AR.25.1 | Uncharacterized protein. | PEEL-1. | 0.977 |
zeel-1 | srr-3 | Y39G10AR.5.1 | F36D3.3.1 | Uncharacterized protein. | Serpentine Receptor, class R. | 0.697 |