STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wrt-3Warthog protein 3; Intercellular signal essential for a variety of patterning events during development. (179 aa)    
Predicted Functional Partners:
Y76B12C.3
Sep15_SelM domain-containing protein.
      
 0.891
scl-3
SCP domain-containing protein; Belongs to the CRISP family.
   
  
 0.855
wrt-10
WaRThog (Hedgehog-like family).
      
 0.811
Y8A9A.2
Uncharacterized protein.
      
 0.806
wrt-7
WaRThog (Hedgehog-like family).
      
 0.766
nas-12
Zinc metalloproteinase nas-12; Metalloprotease.
      
 0.759
wrt-4
Warthog protein 4 C-product; Intercellular signal essential for a variety of patterning events during development.
      
 0.749
ndk-1
Nucleoside diphosphate kinase; Belongs to the NDK family.
   
  
 0.742
wrt-2
WaRThog (Hedgehog-like family).
   
  
 0.698
nhl-2
NHL (Ring finger b-box coiled coil) domain containing.
      
 0.695
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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