STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F39G3.4Cytochrome b561 domain-containing protein. (244 aa)    
Predicted Functional Partners:
C27D9.2
Uncharacterized protein.
   
  
 0.702
wrn-1
Probable Werner syndrome ATP-dependent helicase homolog 1; Essential for the formation of DNA replication focal centers; stably associates with foci elements generating binding sites for RP-A. Exhibits a magnesium-dependent ATP-dependent DNA-helicase activity. May be involved in the control of genomic stability (By similarity).
      
 0.694
pes-8
Patterned Expression Site.
      
 0.614
nlp-32
Neuropeptide-like protein 32; May have antimicrobial activity; Belongs to the YARP (YGGW-amide related peptide) family.
      
 0.512
nas-3
Zinc metalloproteinase nas-3; Metalloprotease.
      
 0.468
arrd-24
Arrestin_C domain-containing protein.
      
 0.465
ugt-33
UDP-GlucuronosylTransferase.
      
 0.461
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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