STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F40B5.2Putative metallophosphoesterase F40B5.2; Belongs to the metallophosphoesterase superfamily. LOC643853 family. (468 aa)    
Predicted Functional Partners:
C29F5.3
RNase_Zc3h12a domain-containing protein.
   
    0.547
D2045.7
Protein kinase domain-containing protein.
   
    0.538
crp-1
Cdc-42 Related Protein.
   
    0.487
F42G8.8
Serine/threonine-protein phosphatase.
   
  
 0.476
C28C12.1
Uncharacterized protein.
   
    0.468
T21C9.11
Uncharacterized protein.
   
    0.468
C05C9.3
Uncharacterized protein.
   
    0.465
F13C5.3
Uncharacterized protein.
   
    0.463
clec-89
C-type LECtin.
   
    0.461
cdap-2
CD2AP homolog.
   
    0.461
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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