STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F40D4.13Uncharacterized protein. (340 aa)    
Predicted Functional Partners:
F58H7.5
Uncharacterized protein.
   
  
 0.918
ZK262.9
Uncharacterized protein.
   
  
 0.915
F41G4.7
Uncharacterized protein.
   
  
 0.913
ZC15.10
Uncharacterized protein.
      
 0.913
ucr-2.1
Ubiquinol-Cytochrome c oxidoReductase complex.
      
 0.809
ZC15.3
Uncharacterized protein.
   
  
 0.708
C18D4.6
Uncharacterized protein.
   
  
 0.605
sygl-1
Uncharacterized protein.
      
 0.543
tbx-2
T-box protein 2; Involved in the development of pharyngeal muscles derived from the ABa lineage.
      
 0.533
epg-5
Ectopic P granules protein 5; Involved in the maturation of autophagosomes into autolysosomes during starvation-induced autotrophy. Specifically, involved in the clearance of apoptotic cells by promoting the delivery of engulfed apoptotic cells to the lysosome.
      
 0.461
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.