STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F45E4.6Uncharacterized protein. (344 aa)    
Predicted Functional Partners:
T15B12.2
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
    0.565
F10D11.3
Uncharacterized protein.
   
    0.538
C09B9.7
WSN domain-containing protein.
   
    0.519
C09H5.7
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
    0.512
F42G8.8
Serine/threonine-protein phosphatase.
   
    0.482
B0218.5
Protein kinase domain-containing protein.
   
    0.473
R01H2.4
Uncharacterized protein.
   
    0.463
Y59E9AR.8
annotation not available
   
    0.432
C17C3.9
Uncharacterized protein.
   
    0.420
F40B5.2
Putative metallophosphoesterase F40B5.2; Belongs to the metallophosphoesterase superfamily. LOC643853 family.
   
    0.420
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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